BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035258
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...    81   1e-13
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               81   1e-13
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    81   1e-13
ref|XP_002531104.1| DNA repair and recombination protein radB, p...    72   4e-11
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin...    69   4e-10

>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 13/74 (17%)
 Frame = -1

Query: 184 MPSVKSLETEHPIINPNFQQFCASHSIFTVENFLLTDM-------------ELLKQGIVQ 44
           M S+KSLE E+PII+ +FQ FCASH IF+VE+ L+ D+             E LKQGI Q
Sbjct: 1   MGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLKQGITQ 60

Query: 43  ILSIINSQHQPWLN 2
           ILSII+ QHQPWLN
Sbjct: 61  ILSIIDGQHQPWLN 74


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 13/74 (17%)
 Frame = -1

Query: 184 MPSVKSLETEHPIINPNFQQFCASHSIFTVENFLLTDM-------------ELLKQGIVQ 44
           M S+KSLE E+PII+ +FQ FCASH IF+VE+ L+ D+             E LKQGI Q
Sbjct: 53  MGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLKQGITQ 112

Query: 43  ILSIINSQHQPWLN 2
           ILSII+ QHQPWLN
Sbjct: 113 ILSIIDGQHQPWLN 126


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 13/74 (17%)
 Frame = -1

Query: 184 MPSVKSLETEHPIINPNFQQFCASHSIFTVENFLLTDM-------------ELLKQGIVQ 44
           M S+KSLE E+PII+ +FQ FCASH IF+VE+ L+ D+             E LKQGI Q
Sbjct: 1   MGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLKQGITQ 60

Query: 43  ILSIINSQHQPWLN 2
           ILSII+ QHQPWLN
Sbjct: 61  ILSIIDGQHQPWLN 74


>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 14/75 (18%)
 Frame = -1

Query: 184 MPSVKSLETEHPIINPNFQQFCASHSIFTVENFLLTDMEL-------------LKQGIVQ 44
           M  +KSLE  + I++ NFQ FCASH+IFTVE+FL+ D++              LK+GI Q
Sbjct: 1   MAPLKSLEKSYSILDSNFQSFCASHAIFTVEDFLIQDLDALATLAEQEPTSQRLKEGINQ 60

Query: 43  ILSIIN-SQHQPWLN 2
           ILSII+  QHQPWLN
Sbjct: 61  ILSIIDKQQHQPWLN 75


>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
           gi|255635337|gb|ACU18022.1| unknown [Glycine max]
          Length = 325

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 13/74 (17%)
 Frame = -1

Query: 184 MPSVKSLETEHPIINPNFQQFCASHSIFTVENFLLTDM-------------ELLKQGIVQ 44
           M  ++SLE E+P+I+ NFQ FCASH IF+VE+FLL D+             + LKQGI Q
Sbjct: 1   MAPLESLEKEYPLIDSNFQSFCASHGIFSVEDFLLHDLDALLSFTDNHSTSQTLKQGIDQ 60

Query: 43  ILSIINSQHQPWLN 2
           ++SII++ H P LN
Sbjct: 61  LISIIDALHPPLLN 74