BLASTX nr result
ID: Coptis23_contig00035257
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00035257 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|2... 234 6e-60 ref|XP_002518468.1| Glucan endo-1,3-beta-glucosidase precursor, ... 233 1e-59 ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp.... 231 6e-59 ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|2... 231 6e-59 gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase pre... 229 1e-58 >ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|222832811|gb|EEE71288.1| predicted protein [Populus trichocarpa] Length = 472 Score = 234 bits (597), Expect = 6e-60 Identities = 110/124 (88%), Positives = 117/124 (94%) Frame = +1 Query: 1 LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180 LDA++DAAYFSMKN+N TDVVVLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHV DRS Sbjct: 204 LDAMVDAAYFSMKNMNFTDVVVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVLDRS 263 Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360 GTPLHPEITSSVYLYELFNEDL + P+SEANWGLFY N TPVYLLHVSGSG+FLA DTTN Sbjct: 264 GTPLHPEITSSVYLYELFNEDLRSPPVSEANWGLFYANSTPVYLLHVSGSGTFLANDTTN 323 Query: 361 QTYC 372 QTYC Sbjct: 324 QTYC 327 >ref|XP_002518468.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223542313|gb|EEF43855.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Length = 533 Score = 233 bits (594), Expect = 1e-59 Identities = 109/124 (87%), Positives = 117/124 (94%) Frame = +1 Query: 1 LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180 LDA+IDAAYFSMKNLN+TDVVVLVTE+GWPS+GDSKEPYATIDNADTYNSNLIKHV DRS Sbjct: 265 LDAMIDAAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATIDNADTYNSNLIKHVLDRS 324 Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360 GTP HPEITSSVY+YELFNEDL + P+SEANWGLFYGN TPVYLLHV GSG+FLA DTTN Sbjct: 325 GTPFHPEITSSVYIYELFNEDLRSPPVSEANWGLFYGNSTPVYLLHVYGSGTFLANDTTN 384 Query: 361 QTYC 372 QTYC Sbjct: 385 QTYC 388 >ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338500|gb|EFH68917.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 484 Score = 231 bits (588), Expect = 6e-59 Identities = 107/124 (86%), Positives = 118/124 (95%) Frame = +1 Query: 1 LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180 LDA++DAAY SMKNLN++DVVVLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHVFDR+ Sbjct: 259 LDAMVDAAYVSMKNLNVSDVVVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRT 318 Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360 GTPLHPE+TSSVY+YELFNEDL SP+SEA+WGLFY N TPVYLLHVSGSG+FLA DTTN Sbjct: 319 GTPLHPEMTSSVYIYELFNEDLRASPVSEASWGLFYANSTPVYLLHVSGSGTFLANDTTN 378 Query: 361 QTYC 372 QTYC Sbjct: 379 QTYC 382 >ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|222859606|gb|EEE97153.1| predicted protein [Populus trichocarpa] Length = 472 Score = 231 bits (588), Expect = 6e-59 Identities = 107/124 (86%), Positives = 115/124 (92%) Frame = +1 Query: 1 LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180 LDA++DAAY+SMKN N TDV VLVTESGWPS+GDSKEPYATIDNADTYNSN+IKHV DRS Sbjct: 204 LDAMVDAAYYSMKNFNFTDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNMIKHVLDRS 263 Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360 GTPLHPEITSSVYLYELFNEDL + P+SEANWGLFY N TPVYLLHVSGSG+FLA DTTN Sbjct: 264 GTPLHPEITSSVYLYELFNEDLRSPPVSEANWGLFYANATPVYLLHVSGSGTFLANDTTN 323 Query: 361 QTYC 372 QTYC Sbjct: 324 QTYC 327 >gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase precursor gb|Z28697 from Nicotiana tabacum. ESTs gb|Z18185 and gb|AA605362 come from this gene [Arabidopsis thaliana] Length = 477 Score = 229 bits (585), Expect = 1e-58 Identities = 106/124 (85%), Positives = 117/124 (94%) Frame = +1 Query: 1 LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180 LDA++DAAY SMKNLN++DV VLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHVFDR+ Sbjct: 259 LDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRT 318 Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360 GTPLHPE+TSSVY+YELFNEDL P+SEA+WGLFYGN TPVYLLHVSGSG+FLA DTTN Sbjct: 319 GTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTN 378 Query: 361 QTYC 372 QTYC Sbjct: 379 QTYC 382