BLASTX nr result

ID: Coptis23_contig00035257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035257
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|2...   234   6e-60
ref|XP_002518468.1| Glucan endo-1,3-beta-glucosidase precursor, ...   233   1e-59
ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp....   231   6e-59
ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59
gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase pre...   229   1e-58

>ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|222832811|gb|EEE71288.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  234 bits (597), Expect = 6e-60
 Identities = 110/124 (88%), Positives = 117/124 (94%)
 Frame = +1

Query: 1   LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180
           LDA++DAAYFSMKN+N TDVVVLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHV DRS
Sbjct: 204 LDAMVDAAYFSMKNMNFTDVVVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVLDRS 263

Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360
           GTPLHPEITSSVYLYELFNEDL + P+SEANWGLFY N TPVYLLHVSGSG+FLA DTTN
Sbjct: 264 GTPLHPEITSSVYLYELFNEDLRSPPVSEANWGLFYANSTPVYLLHVSGSGTFLANDTTN 323

Query: 361 QTYC 372
           QTYC
Sbjct: 324 QTYC 327


>ref|XP_002518468.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223542313|gb|EEF43855.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 533

 Score =  233 bits (594), Expect = 1e-59
 Identities = 109/124 (87%), Positives = 117/124 (94%)
 Frame = +1

Query: 1   LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180
           LDA+IDAAYFSMKNLN+TDVVVLVTE+GWPS+GDSKEPYATIDNADTYNSNLIKHV DRS
Sbjct: 265 LDAMIDAAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATIDNADTYNSNLIKHVLDRS 324

Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360
           GTP HPEITSSVY+YELFNEDL + P+SEANWGLFYGN TPVYLLHV GSG+FLA DTTN
Sbjct: 325 GTPFHPEITSSVYIYELFNEDLRSPPVSEANWGLFYGNSTPVYLLHVYGSGTFLANDTTN 384

Query: 361 QTYC 372
           QTYC
Sbjct: 385 QTYC 388


>ref|XP_002892658.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338500|gb|EFH68917.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  231 bits (588), Expect = 6e-59
 Identities = 107/124 (86%), Positives = 118/124 (95%)
 Frame = +1

Query: 1   LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180
           LDA++DAAY SMKNLN++DVVVLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHVFDR+
Sbjct: 259 LDAMVDAAYVSMKNLNVSDVVVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRT 318

Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360
           GTPLHPE+TSSVY+YELFNEDL  SP+SEA+WGLFY N TPVYLLHVSGSG+FLA DTTN
Sbjct: 319 GTPLHPEMTSSVYIYELFNEDLRASPVSEASWGLFYANSTPVYLLHVSGSGTFLANDTTN 378

Query: 361 QTYC 372
           QTYC
Sbjct: 379 QTYC 382


>ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|222859606|gb|EEE97153.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  231 bits (588), Expect = 6e-59
 Identities = 107/124 (86%), Positives = 115/124 (92%)
 Frame = +1

Query: 1   LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180
           LDA++DAAY+SMKN N TDV VLVTESGWPS+GDSKEPYATIDNADTYNSN+IKHV DRS
Sbjct: 204 LDAMVDAAYYSMKNFNFTDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNMIKHVLDRS 263

Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360
           GTPLHPEITSSVYLYELFNEDL + P+SEANWGLFY N TPVYLLHVSGSG+FLA DTTN
Sbjct: 264 GTPLHPEITSSVYLYELFNEDLRSPPVSEANWGLFYANATPVYLLHVSGSGTFLANDTTN 323

Query: 361 QTYC 372
           QTYC
Sbjct: 324 QTYC 327


>gb|AAC17632.1| Similar to glucan endo-1,3-beta-D-glucosidase precursor gb|Z28697
           from Nicotiana tabacum. ESTs gb|Z18185 and gb|AA605362
           come from this gene [Arabidopsis thaliana]
          Length = 477

 Score =  229 bits (585), Expect = 1e-58
 Identities = 106/124 (85%), Positives = 117/124 (94%)
 Frame = +1

Query: 1   LDALIDAAYFSMKNLNITDVVVLVTESGWPSRGDSKEPYATIDNADTYNSNLIKHVFDRS 180
           LDA++DAAY SMKNLN++DV VLVTESGWPS+GDSKEPYATIDNADTYNSNLIKHVFDR+
Sbjct: 259 LDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRT 318

Query: 181 GTPLHPEITSSVYLYELFNEDLITSPLSEANWGLFYGNVTPVYLLHVSGSGSFLAKDTTN 360
           GTPLHPE+TSSVY+YELFNEDL   P+SEA+WGLFYGN TPVYLLHVSGSG+FLA DTTN
Sbjct: 319 GTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTN 378

Query: 361 QTYC 372
           QTYC
Sbjct: 379 QTYC 382


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