BLASTX nr result

ID: Coptis23_contig00035239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035239
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236528.1| uncharacterized protein LOC100306545 [Glycin...    96   6e-18
ref|XP_003601472.1| hypothetical protein MTR_3g082070 [Medicago ...    93   3e-17
gb|AFK48023.1| unknown [Medicago truncatula]                           92   6e-17
ref|XP_003556850.1| PREDICTED: uncharacterized protein LOC100782...    92   6e-17
ref|XP_002308774.1| predicted protein [Populus trichocarpa] gi|1...    90   2e-16

>ref|NP_001236528.1| uncharacterized protein LOC100306545 [Glycine max]
           gi|255628841|gb|ACU14765.1| unknown [Glycine max]
          Length = 171

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 62/151 (41%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
 Frame = +1

Query: 70  MIIERVITIEYLQPSMSQELLCKFPDQSVYDFDYTQSGIWSPLLPRGHLSSFQVSPFE-- 243
           ++++    +EYL P MS ELLCKFPD S YDFDY+QS IWSPLLPR +      SP +  
Sbjct: 14  LVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRPY------SPMDLD 67

Query: 244 -VRRRLLEYDDGVEVLQEKTRKVGSKIKKKV--------IXXXXXXXXXXXXXXXLDFSV 396
            +  + L YD G+   +   +KVGSK++KK         +                DFS 
Sbjct: 68  LITPKKLSYDMGLGA-KCSVKKVGSKLRKKFTASAFNLNLDFIKKNSKSKNKKLPSDFSP 126

Query: 397 TPVTESSP---KKGWAKALRAASKPFKKHKV 480
           TP   +      K WA+AL+AASK FKK KV
Sbjct: 127 TPFKGACNPILNKRWARALKAASKQFKKWKV 157


>ref|XP_003601472.1| hypothetical protein MTR_3g082070 [Medicago truncatula]
           gi|355490520|gb|AES71723.1| hypothetical protein
           MTR_3g082070 [Medicago truncatula]
          Length = 175

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
 Frame = +1

Query: 31  SKTQQEELARTKKMIIERVITIEYLQPSMSQELLCKFPDQSVYDFDYTQSGIWSPLLPRG 210
           S  + E+  + + +++     +EYL+P MS ELLCKFPD S YDFDY+QS IWSPL+PR 
Sbjct: 3   SVEEAEQQQQQQPLLLNTTKVVEYLEPFMSLELLCKFPDNSAYDFDYSQSTIWSPLVPRP 62

Query: 211 HLSSFQVSPFE---VRRRLLEYDDGVEVLQEKTRKVGSKIKKKVIXXXXXXXXXXXXXXX 381
           +      SP +   +  + L YD  +   +    KVGSK++KK                 
Sbjct: 63  Y------SPMDLDLITPKKLSYDIALGA-RCSVNKVGSKLRKKFTSNSFNLKFGFIKNKK 115

Query: 382 L--DFSVTP------VTESSPKKGWAKALRAASKPFKKHKV 480
           +  DFS TP             K W +AL+AASK FKK KV
Sbjct: 116 IASDFSPTPSRIKCACNPIINNKRWGRALKAASKQFKKWKV 156


>gb|AFK48023.1| unknown [Medicago truncatula]
          Length = 174

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
 Frame = +1

Query: 40  QQEELARTKKMIIERVITIEYLQPSMSQELLCKFPDQSVYDFDYTQSGIWSPLLPRGHLS 219
           ++ E  + + +++     +EYL+P MS ELLCKFPD S YDFDY+QS IWSPL+PR +  
Sbjct: 5   EEAEQQQQQPLLLNTTKVVEYLEPFMSLELLCKFPDNSAYDFDYSQSTIWSPLVPRPY-- 62

Query: 220 SFQVSPFE---VRRRLLEYDDGVEVLQEKTRKVGSKIKKKVIXXXXXXXXXXXXXXXL-- 384
               SP +   V  + L YD  +   +    KVGSK++K+                 +  
Sbjct: 63  ----SPMDLDLVTPKKLSYDIALGA-RCSVNKVGSKLRKRFTSNSFNLKFGFIKNKKIAS 117

Query: 385 DFSVTP------VTESSPKKGWAKALRAASKPFKKHKV 480
           DFS TP             K W +AL+AASK FKK KV
Sbjct: 118 DFSPTPPRIKCACNPIINNKRWGRALKAASKQFKKWKV 155


>ref|XP_003556850.1| PREDICTED: uncharacterized protein LOC100782632 [Glycine max]
          Length = 161

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
 Frame = +1

Query: 34  KTQQEELARTKKMIIERVITIEYLQPSMSQELLCKFPDQSVYDFDYTQSGIWSPLLPRGH 213
           ++Q+E     + ++++    +EYL P MS ELLCKFPD S YDFDY+QS IWSPLLPR +
Sbjct: 2   ESQREYEKEEEALVLKTTKVVEYLVPKMSIELLCKFPDNSAYDFDYSQSTIWSPLLPRPY 61

Query: 214 LSSFQVSPFE---VRRRLLEYDDGVEVLQEKTRKVGSKIKKKV--------IXXXXXXXX 360
                 +P +   +  + L YD+          KVGSK++KK         +        
Sbjct: 62  ------TPMDLDLITPKKLSYDE----------KVGSKLRKKFTASTFNLNLDFIRKNSK 105

Query: 361 XXXXXXXLDFSVTP---VTESSPKKGWAKALRAASKPFKKHKV 480
                   +FS TP          K WA+AL+AASK FKK KV
Sbjct: 106 SKNKKVPSEFSPTPFRGACNPIMNKRWARALKAASKQFKKWKV 148


>ref|XP_002308774.1| predicted protein [Populus trichocarpa] gi|118488537|gb|ABK96081.1|
           unknown [Populus trichocarpa]
           gi|222854750|gb|EEE92297.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
 Frame = +1

Query: 40  QQEELARTKKMIIERVITIEYLQPSMSQELLCKFPDQSVYDFDYTQSGIWSPLLPRGH-- 213
           +QEE   T ++I  +V+  EYL+P MS+ELL KFPD S +DFDY QS IWSPL+PR +  
Sbjct: 10  EQEEEEETARLISCKVV--EYLEPVMSKELLFKFPDNSAFDFDYAQSSIWSPLVPRNYSP 67

Query: 214 LSSFQVSPFEVRRRLLEYDDGVEVLQEKTRKVGSKIKKK--------------VIXXXXX 351
           +    V+P ++        D     +  ++K+ S IKKK                     
Sbjct: 68  MDLDLVTPTKIAFGFGSELDNKNSSRSGSKKLSSSIKKKKKMMMKKMAISTTAFNVSLSK 127

Query: 352 XXXXXXXXXXLDFSVTPVTESS---PKKGWAKALRAASKPFKKHKVA-PSLQIRLQNFL 516
                      +FS T +  S    P KGW K L+AA+K FKK K   P+  ++L N+L
Sbjct: 128 LKIRKHKVKVSEFSPTSIKTSCVPFPTKGWNKVLKAATKHFKKRKKKDPTAHVKLSNYL 186


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