BLASTX nr result

ID: Coptis23_contig00035234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035234
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145891.1| PREDICTED: 8-amino-7-oxononanoate synthase-l...   120   1e-25
ref|XP_002268950.1| PREDICTED: 8-amino-7-oxononanoate synthase [...   118   4e-25
ref|XP_002871105.1| predicted protein [Arabidopsis lyrata subsp....   115   3e-24
ref|NP_974731.1| 8-amino-7-oxononanoate synthase [Arabidopsis th...   113   1e-23
ref|XP_003527547.1| PREDICTED: 8-amino-7-oxononanoate synthase-l...   113   1e-23

>ref|XP_004145891.1| PREDICTED: 8-amino-7-oxononanoate synthase-like [Cucumis sativus]
           gi|449526960|ref|XP_004170481.1| PREDICTED:
           8-amino-7-oxononanoate synthase-like [Cucumis sativus]
          Length = 477

 Score =  120 bits (301), Expect = 1e-25
 Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 19/134 (14%)
 Frame = +2

Query: 53  SSWDTLVEKAVSKLDTLNLLRSLRPISVSTTTTH---------EKDFKTFDGLQSWDRCS 205
           S WD  VE+A++KL  L LLRSLRPI+ S    +         + + K FD +Q WDR S
Sbjct: 2   SVWDCCVEEALAKLGLLQLLRSLRPITPSLEKLNPEASIEGKKDDELKVFDEMQPWDRAS 61

Query: 206 VEIQLSESTFQEWAHNVPSSGGN-----GNMK-----PGSLRKLILFSGNDYLGLSSHPT 355
           VE++++EST Q+W  ++PSSG       G +K     P   +KL+LFSGNDYLGLSSHPT
Sbjct: 62  VEVEIAESTVQKWLLDIPSSGDEIVTEGGAIKCLVDHPQQFKKLVLFSGNDYLGLSSHPT 121

Query: 356 VRRAAAEAALQHGM 397
           + RAAA+AAL+H M
Sbjct: 122 IGRAAAQAALEHRM 135


>ref|XP_002268950.1| PREDICTED: 8-amino-7-oxononanoate synthase [Vitis vinifera]
           gi|297743573|emb|CBI36440.3| unnamed protein product
           [Vitis vinifera]
          Length = 472

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 11/126 (8%)
 Frame = +2

Query: 53  SSWDTLVEKAVSKLDTLNLLRSLRPISVSTTTTHEKDFKTFDGLQSWDRCSVEIQLSEST 232
           +SWD+ V++A+S+L +L L+RSLRPI +       +DF+ F  L  WDR ++EI++SE T
Sbjct: 6   NSWDSWVDQALSRLHSLKLIRSLRPIHLPNPLPTPRDFEVFHHLSPWDRLAIEIKISEPT 65

Query: 233 FQEWAHNVPSSG-----GNG------NMKPGSLRKLILFSGNDYLGLSSHPTVRRAAAEA 379
           F +W + +PSSG     G+G       +     R L+LFSGNDYLGLSSHPT+ +AAA+A
Sbjct: 66  FLKWVNEIPSSGDEAACGDGLDDEKVGVSHQKSRDLLLFSGNDYLGLSSHPTIGKAAAKA 125

Query: 380 ALQHGM 397
           A +HGM
Sbjct: 126 AQEHGM 131


>ref|XP_002871105.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316942|gb|EFH47364.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 476

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 16/130 (12%)
 Frame = +2

Query: 56  SWDTLVEKAVSKLDTLNLLRSLRPISVSTTTTHE---------KDFKTFDGLQSWDRCSV 208
           SWD  VE+AV+ L++  +LRSLRPI +S     E          +++ FDGL  WDR SV
Sbjct: 5   SWDKCVEEAVNVLESRQILRSLRPICMSRQNEEEIVKIIGNGGDEYEVFDGLCQWDRTSV 64

Query: 209 EIQLSESTFQEWAHNVPSSGGN-------GNMKPGSLRKLILFSGNDYLGLSSHPTVRRA 367
           E+ +S  TFQ+W H+ PS+G            + G  +KL+LFSGNDYLGLSSHPT+  A
Sbjct: 65  EVSVSIPTFQKWLHDGPSNGEEIFSGDALAESRKGRFKKLLLFSGNDYLGLSSHPTISNA 124

Query: 368 AAEAALQHGM 397
           AA AA ++GM
Sbjct: 125 AANAAKEYGM 134


>ref|NP_974731.1| 8-amino-7-oxononanoate synthase [Arabidopsis thaliana]
           gi|67847131|gb|AAY82238.1| 7-keto-8-amino pelargonic
           acid synthase [Arabidopsis thaliana]
           gi|332003382|gb|AED90765.1| 8-amino-7-oxononanoate
           synthase [Arabidopsis thaliana]
          Length = 476

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/130 (46%), Positives = 79/130 (60%), Gaps = 16/130 (12%)
 Frame = +2

Query: 56  SWDTLVEKAVSKLDTLNLLRSLRPISVSTTTTHE---------KDFKTFDGLQSWDRCSV 208
           SWD  VE+AV+ L++  +LRSLRPI +S     E           ++ FDGL  WDR SV
Sbjct: 5   SWDKTVEEAVNVLESRQILRSLRPICMSRQNEEEIVKSRANGGDGYEVFDGLCQWDRTSV 64

Query: 209 EIQLSESTFQEWAHNVPSSGGN-------GNMKPGSLRKLILFSGNDYLGLSSHPTVRRA 367
           E+ +S  TFQ+W H+ PS+G            + G  +KL+LFSGNDYLGLSSHPT+  A
Sbjct: 65  EVSVSIPTFQKWLHDEPSNGEEIFSGDALAECRKGRFKKLLLFSGNDYLGLSSHPTISNA 124

Query: 368 AAEAALQHGM 397
           AA A  ++GM
Sbjct: 125 AANAVKEYGM 134


>ref|XP_003527547.1| PREDICTED: 8-amino-7-oxononanoate synthase-like [Glycine max]
          Length = 477

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 16/132 (12%)
 Frame = +2

Query: 50  TSSWDTLVEKAVSKLDTLNLLRSLRPISVSTTTTHE-----KDFKTFDGLQSWDRCSVEI 214
           ++ WD  V +A+  L +L +LRSLRPI + ++   E       F+ FD +Q WDR SVE+
Sbjct: 5   SACWDNWVGEALETLYSLKVLRSLRPICLRSSQPREFGADDDAFQVFDEMQHWDRSSVEV 64

Query: 215 QLSESTFQEWAHNVPSSG-----------GNGNMKPGSLRKLILFSGNDYLGLSSHPTVR 361
           +++E+TF  W H+ PSSG           G         +KLILFSGNDYLGLSSHPT+ 
Sbjct: 65  EIAETTFSRWMHDTPSSGDEIVCSATGGDGEAGASYEKFKKLILFSGNDYLGLSSHPTIG 124

Query: 362 RAAAEAALQHGM 397
           +A A+AA +HGM
Sbjct: 125 KAVAKAAQEHGM 136


Top