BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035232
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   199   1e-49
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   199   1e-49
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   181   4e-44

>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  199 bits (507), Expect = 1e-49
 Identities = 92/112 (82%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    KKEPGMSWVEVKDKVHTFIVGDKNHSRTEEIYAKLDELSDPLDKAGYVPMVETDLHDVEE 180
            KKEPGMSW+EVKDKV+TF+VGD++H R++EIYAKLDELSD +DKAGYVPMVE DLHDVE+
Sbjct: 796  KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQ 855

Query: 181  SEKQMLLYQHSEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIV 336
            SEK++LLY HSEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIV
Sbjct: 856  SEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIV 907


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  199 bits (507), Expect = 1e-49
 Identities = 92/112 (82%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    KKEPGMSWVEVKDKVHTFIVGDKNHSRTEEIYAKLDELSDPLDKAGYVPMVETDLHDVEE 180
            KKEPGMSW+EVKDKV+TF+VGD++H R++EIYAKLDELSD +DKAGYVPMVE DLHDVE+
Sbjct: 769  KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQ 828

Query: 181  SEKQMLLYQHSEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIV 336
            SEK++LLY HSEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIV
Sbjct: 829  SEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIV 880


>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  190 bits (483), Expect = 9e-47
 Identities = 91/112 (81%), Positives = 99/112 (88%)
 Frame = +1

Query: 1   KKEPGMSWVEVKDKVHTFIVGDKNHSRTEEIYAKLDELSDPLDKAGYVPMVETDLHDVEE 180
           KKEPGMSW+EVKDKV+TFIVGD++HSR+ EIYAKLDELSD L KAGYVPMVE DLHDVE 
Sbjct: 649 KKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVER 708

Query: 181 SEKQMLLYQHSEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIV 336
           SEK+ LLY HSEKLAVAFGLIATP G PIRVKKNLR+C DCHT  KF+ KIV
Sbjct: 709 SEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIV 760


>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 858

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/112 (77%), Positives = 102/112 (91%)
 Frame = +1

Query: 1    KKEPGMSWVEVKDKVHTFIVGDKNHSRTEEIYAKLDELSDPLDKAGYVPMVETDLHDVEE 180
            KKEPGMSW+E+KDKV+TFIVGD++HSR++EIYAKLD+L D L KAGY  +VE D+H+V++
Sbjct: 721  KKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDK 780

Query: 181  SEKQMLLYQHSEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIV 336
            SEK+ LLY HSEKLAVAFGLIATP G PIRVKKNLR+CVDCHTFFKFVCKIV
Sbjct: 781  SEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIV 832


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  181 bits (460), Expect = 4e-44
 Identities = 82/111 (73%), Positives = 98/111 (88%)
 Frame = +1

Query: 1    KKEPGMSWVEVKDKVHTFIVGDKNHSRTEEIYAKLDELSDPLDKAGYVPMVETDLHDVEE 180
            KKEPGMSW+E+KDKV+TFIVGD++H R++EIY KLD+L + L  AGYVPM+ETDLHDVE+
Sbjct: 726  KKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQ 785

Query: 181  SEKQMLLYQHSEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKI 333
             EK+ LL+ HSEKLAVAFGLIATP G PIRVKKNLRVC+DCHT FKF+ K+
Sbjct: 786  IEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKV 836