BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035213
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...    80   2e-13
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...    75   7e-12
ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...    75   7e-12
ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...    70   1e-10
ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-li...    66   3e-09

>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 PQLDKAVGIYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSSNFSV*FLSDL 54
           PQ++KAV +YEEALK VPS  M SLYA F  D+I+ +   T I+G   SS  +V ++S L
Sbjct: 343 PQVEKAVQVYEEALKNVPSGTMFSLYANFLTDIIAPKEGETDING---SSGCAVNYISHL 399

Query: 53  LKVYGKAESMGCMTEDL 3
           L +Y +AESMGC+TEDL
Sbjct: 400 LSIYERAESMGCITEDL 416


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/77 (49%), Positives = 53/77 (68%)
 Frame = -1

Query: 233 PQLDKAVGIYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSSNFSV*FLSDL 54
           PQ++KAV +YEEAL+ VPS  M  LYA F  D+++ +   T I+G   SS  +  ++S L
Sbjct: 350 PQVEKAVQVYEEALENVPSGTMFCLYANFLTDIVAHKEGETNING---SSGHAANYISHL 406

Query: 53  LKVYGKAESMGCMTEDL 3
           L +Y +AESMGC+TEDL
Sbjct: 407 LLIYERAESMGCITEDL 423


>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -1

Query: 230 QLDKAVGIYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSSNFSV*FLSDLL 51
           +L KAV +YEEALK++PSA M +LY KF MD I +    TK S    +S  +V  LS LL
Sbjct: 345 RLQKAVQVYEEALKFLPSAVMFNLYTKFLMDAI-VSREKTKNSEPFSTSEHTVGSLSHLL 403

Query: 50  KVYGKAESMGCMTEDL 3
            VY KAE+MGC+TEDL
Sbjct: 404 MVYEKAENMGCLTEDL 419


>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = -1

Query: 233 PQLDKAVGIYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSSNFSV*FLSDL 54
           PQL KAV +YEEAL++V S  M SLYAKF MDVI+ +  + ++SG A  +      LS L
Sbjct: 345 PQLQKAVQVYEEALQFVSSPTMFSLYAKFLMDVIAPKREDNQLSGPASHTKHQ---LSHL 401

Query: 53  LKVYGKAESMGCMTED 6
           L ++ KAE  GC++ED
Sbjct: 402 LTIFKKAEISGCISED 417


>ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355511509|gb|AES92651.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 665

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/77 (44%), Positives = 47/77 (61%)
 Frame = -1

Query: 233 PQLDKAVGIYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSSNFSV*FLSDL 54
           PQ+ KA+ +YEEALK VPS  M SLYA F M +++ +     I G          ++S L
Sbjct: 346 PQVQKAIQVYEEALKSVPSGTMFSLYANFLMGIVAPKDEEPNIDGP---------YISHL 396

Query: 53  LKVYGKAESMGCMTEDL 3
           L +Y +AESMG +T+DL
Sbjct: 397 LSIYERAESMGIITDDL 413