BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035206
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus ...    74   1e-11
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    71   8e-11
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    69   3e-10
ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    69   5e-10

>ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542642|gb|EEF44179.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 257

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/58 (55%), Positives = 45/58 (77%)
 Frame = -1

Query: 189 MSNLPEEMITSILSRLPVKPLLQFKSVCKSWYCLINDPIFIKMHLKHATRNNNLNAMY 16
           MS LP+++IT ILSR+PVKPL++FK +CK+W  LI++P F K+ LK A  NNN++  Y
Sbjct: 1   MSKLPQDLITEILSRVPVKPLIRFKCICKTWNSLISNPEFAKLQLKRAKENNNVSNHY 58


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -1

Query: 201 SFPRMSNLPEEMITSILSRLPVKPLLQFKSVCKSWYCLINDPIFIKMHLKHATRNNNLNA 22
           + P    LP+E++  ILSRLPV+ L+Q K VCKSW  +I+DP FIKMHL  + RN N + 
Sbjct: 87  NLPPSETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSV 146

Query: 21  MYFD 10
           + ++
Sbjct: 147 VSYE 150


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -1

Query: 189 MSNLPEEMITSILSRLPVKPLLQFKSVCKSWYCLINDPIFIKMHLKHATRNNNLN 25
           MS LP+++I  IL+ LPVK L++FK VCK W  LI+DP F+K+HLK A   NN+N
Sbjct: 1   MSKLPQDIIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNIN 55


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -1

Query: 189 MSNLPEEMITSILSRLPVKPLLQFKSVCKSWYCLINDPIFIKMHLKHATRNNNLN 25
           M+NL ++++  IL RLPVK L +FK VCKSW+ LI+DP FI MHL  AT+NN +N
Sbjct: 1   MANLVQDVVLHILLRLPVKSLCRFKVVCKSWWLLISDPHFISMHLSLATKNNCIN 55


>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -1

Query: 189 MSNLPEEMITSILSRLPVKPLLQFKSVCKSWYCLINDPIFIKMHLKHATRNNNLN 25
           +S LPE++I  ILSR+PVKPLL+FK V KSW  +I+DP F K+ LK A  N+N++
Sbjct: 50  ISTLPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAKLQLKRAKENSNIS 104