BLASTX nr result

ID: Coptis23_contig00035204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035204
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194449.1| NB-ARC domain-containing disease resistance pro...    64   2e-08
gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. ...    62   4e-08
ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arab...    62   6e-08
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...    59   5e-07

>ref|NP_194449.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46396029|sp|Q9T048.1|DRL27_ARATH RecName:
           Full=Disease resistance protein At4g27190
           gi|4490715|emb|CAB38849.1| putative protein [Arabidopsis
           thaliana] gi|7269572|emb|CAB79574.1| putative protein
           [Arabidopsis thaliana] gi|91806730|gb|ABE66092.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659911|gb|AEE85311.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 985

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/84 (35%), Positives = 53/84 (63%)
 Frame = +3

Query: 3   WDLFVSKAGYKVLSPDIQPIARQMLRECDCLPILVVSLGHAMRGEVKIKVWEKVLLEFSS 182
           W+LF   AG  V S  ++ IA+ + +EC  LP+ ++++G AMRG+  +K+W  VL + S 
Sbjct: 308 WELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSK 367

Query: 183 SLTMSRDMEEKNPQLLRINHSRLK 254
           S+   + +EEK  Q L++++  L+
Sbjct: 368 SVPWIKSIEEKIFQPLKLSYDFLE 391


>gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1009

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 52/84 (61%)
 Frame = +3

Query: 3   WDLFVSKAGYKVLSPDIQPIARQMLRECDCLPILVVSLGHAMRGEVKIKVWEKVLLEFSS 182
           W++F   AG       ++PIA+++ REC  LP+ +V++G AMRG+ K+ +W+  L E   
Sbjct: 312 WEMFCKNAGEVTRLDRVRPIAKEVSRECGGLPLAIVTVGMAMRGKKKVNLWKHALEELKC 371

Query: 183 SLTMSRDMEEKNPQLLRINHSRLK 254
           S+   + +EEK  Q L+ +++ L+
Sbjct: 372 SVPYVKSIEEKVYQPLKWSYNLLE 395


>ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arabidopsis lyrata subsp.
           lyrata] gi|297313355|gb|EFH43778.1| hypothetical protein
           ARALYDRAFT_492076 [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/84 (35%), Positives = 51/84 (60%)
 Frame = +3

Query: 3   WDLFVSKAGYKVLSPDIQPIARQMLRECDCLPILVVSLGHAMRGEVKIKVWEKVLLEFSS 182
           W+LF   AG  V S  ++ IA+ +  EC  LP+ ++++G AMRG   +K+W  VL + S 
Sbjct: 284 WELFCRNAGDVVKSDHVRSIAKAVSLECGGLPLAIITVGTAMRGSKNVKLWNHVLSKLSK 343

Query: 183 SLTMSRDMEEKNPQLLRINHSRLK 254
           S+   + +EEK  Q L++++  L+
Sbjct: 344 SVPWIKSIEEKIFQPLKLSYDFLE 367


>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   WDLFVSKAGYKV-LSPDIQPIARQMLRECDCLPILVVSLGHAMRGEVKIKVWEKVLLEFS 179
           W LF+ + G+   LSP+++ IA+ + REC  LP+ ++++   MRG V ++ W   L E  
Sbjct: 18  WALFIERLGHDTALSPEVEQIAKSVARECAGLPLGIITMAATMRGVVDVREWRNALEELK 77

Query: 180 SSLTMSRDMEEKNPQLLRINHSRL 251
            S     DME +   +LR +++ L
Sbjct: 78  ESKVRKDDMEPEVFHILRFSYNHL 101


>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   WDLFVSKAGYKV-LSPDIQPIARQMLRECDCLPILVVSLGHAMRGEVKIKVWEKVLLEFS 179
           W LF+ + G+   LSP+++ IA+ + REC  LP+ V+++   MRG V ++ W   L E  
Sbjct: 204 WALFIERLGHDTALSPEVEQIAKSVARECAGLPLGVITMAATMRGVVDVREWRNALEELR 263

Query: 180 SSLTMSRDMEEKNPQLLRINHSRL 251
            S     DME     +LR +++ L
Sbjct: 264 ESKVRKDDMEPDVFYILRFSYNHL 287


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