BLASTX nr result

ID: Coptis23_contig00035198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035198
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525226.1| PREDICTED: microtubule-associated protein 70...    47   1e-08
ref|XP_003630950.1| microtubule associated protein Type 2 [Medic...    45   8e-07

>ref|XP_003525226.1| PREDICTED: microtubule-associated protein 70-2-like [Glycine max]
          Length = 616

 Score = 47.0 bits (110), Expect(2) = 1e-08
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +3

Query: 102 TERIVSGLLYDMLQKEVIALRKSGHKKDRS 191
           TE  V G+LYD+LQKEV+ALRK+GH+KD+S
Sbjct: 501 TEDSVPGVLYDLLQKEVLALRKAGHEKDQS 530



 Score = 37.0 bits (84), Expect(2) = 1e-08
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = +2

Query: 5   PNSSLNTSSEGTGDGEAS---KANLD*KPSEVPDFD*KDCV 118
           P+ S N SSEGT DGE +   K N D KP+++P  D +D V
Sbjct: 465 PSYSFNQSSEGTKDGEENDKWKGNSDDKPNDLPTVDTEDSV 505


>ref|XP_003630950.1| microtubule associated protein Type 2 [Medicago truncatula]
           gi|355524972|gb|AET05426.1| microtubule associated
           protein Type 2 [Medicago truncatula]
          Length = 627

 Score = 44.7 bits (104), Expect(2) = 8e-07
 Identities = 20/33 (60%), Positives = 28/33 (84%)
 Frame = +3

Query: 93  LILTERIVSGLLYDMLQKEVIALRKSGHKKDRS 191
           L+ T+  V G+LYD+LQKEV+ LRK+GH+KD+S
Sbjct: 509 LVDTKDNVPGVLYDLLQKEVLGLRKAGHEKDQS 541



 Score = 33.1 bits (74), Expect(2) = 8e-07
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = +2

Query: 5   PNSSLNTSSEGTGDGEAS---KANLD*KPSEVPDFD*KDCV 118
           P+SS N SSE T D E +   K +LD KP+++P  D KD V
Sbjct: 476 PSSSFNQSSERTKDKEENNNWKGSLDDKPNDLPLVDTKDNV 516


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