BLASTX nr result

ID: Coptis23_contig00035194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035194
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513971.1| queuine tRNA-ribosyltransferase, putative [R...    60   2e-10
gb|EAZ09442.1| hypothetical protein OsI_31716 [Oryza sativa Indi...    59   4e-10
ref|NP_001063434.1| Os09g0469900 [Oryza sativa Japonica Group] g...    59   4e-10
ref|XP_002460237.1| hypothetical protein SORBIDRAFT_02g025090 [S...    59   4e-10
dbj|BAK04080.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   4e-10

>ref|XP_002513971.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis]
           gi|223547057|gb|EEF48554.1| queuine
           tRNA-ribosyltransferase, putative [Ricinus communis]
          Length = 403

 Score = 59.7 bits (143), Expect(2) = 2e-10
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = +3

Query: 81  ENRIGADIIMALDDVVKTTITGPRIEEAMY 170
           +NRIGADIIMALDDVV+TTITGPRIEEAMY
Sbjct: 138 QNRIGADIIMALDDVVRTTITGPRIEEAMY 167



 Score = 30.0 bits (66), Expect(2) = 2e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 172 RTLCWIDRCIAAH 210
           RTL WIDRCIAAH
Sbjct: 168 RTLRWIDRCIAAH 180


>gb|EAZ09442.1| hypothetical protein OsI_31716 [Oryza sativa Indica Group]
           gi|222641751|gb|EEE69883.1| hypothetical protein
           OsJ_29703 [Oryza sativa Japonica Group]
          Length = 446

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 81  ENRIGADIIMALDDVVKTTITGPRIEEAMY 170
           +N IGADIIMALDDVVKTTITGPRIEEAMY
Sbjct: 133 QNNIGADIIMALDDVVKTTITGPRIEEAMY 162



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 172 RTLCWIDRCIAAH 210
           RTL WIDRCIAAH
Sbjct: 163 RTLRWIDRCIAAH 175


>ref|NP_001063434.1| Os09g0469900 [Oryza sativa Japonica Group]
           gi|47497688|dbj|BAD19755.1| putative queuine
           tRNA-ribosyltransferase [Oryza sativa Japonica Group]
           gi|47848408|dbj|BAD22266.1| putative queuine
           tRNA-ribosyltransferase [Oryza sativa Japonica Group]
           gi|113631667|dbj|BAF25348.1| Os09g0469900 [Oryza sativa
           Japonica Group]
          Length = 417

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 81  ENRIGADIIMALDDVVKTTITGPRIEEAMY 170
           +N IGADIIMALDDVVKTTITGPRIEEAMY
Sbjct: 133 QNNIGADIIMALDDVVKTTITGPRIEEAMY 162



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 172 RTLCWIDRCIAAH 210
           RTL WIDRCIAAH
Sbjct: 163 RTLRWIDRCIAAH 175


>ref|XP_002460237.1| hypothetical protein SORBIDRAFT_02g025090 [Sorghum bicolor]
           gi|241923614|gb|EER96758.1| hypothetical protein
           SORBIDRAFT_02g025090 [Sorghum bicolor]
          Length = 417

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 81  ENRIGADIIMALDDVVKTTITGPRIEEAMY 170
           +N IGADIIMALDDVVKTTITGPRIEEAMY
Sbjct: 133 QNNIGADIIMALDDVVKTTITGPRIEEAMY 162



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 172 RTLCWIDRCIAAH 210
           RTL WIDRCIAAH
Sbjct: 163 RTLRWIDRCIAAH 175


>dbj|BAK04080.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 320

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 81  ENRIGADIIMALDDVVKTTITGPRIEEAMY 170
           +N IGADIIMALDDVVKTTITGPRIEEAMY
Sbjct: 36  QNNIGADIIMALDDVVKTTITGPRIEEAMY 65



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 172 RTLCWIDRCIAAH 210
           RTL WIDRCIAAH
Sbjct: 66  RTLRWIDRCIAAH 78


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