BLASTX nr result

ID: Coptis23_contig00035190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035190
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36302.3| unnamed protein product [Vitis vinifera]              183   4e-44
ref|XP_002517616.1| KOM, putative [Ricinus communis] gi|22354324...   169   4e-40
emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]   168   1e-39
emb|CBI16118.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Viti...   167   2e-39

>emb|CBI36302.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  183 bits (464), Expect = 4e-44
 Identities = 95/204 (46%), Positives = 124/204 (60%)
 Frame = -3

Query: 711 LQKVGALILKLVVEEGETWRLISCMWLHAGVIHLLANMISLLFVGIRLEKEFGYWKIXXX 532
           L+K+GAL  KLVV+EGE WRL+SC+WLHAG IHL+ANM+SLLF+G++LE+EFG+ +I   
Sbjct: 94  LEKLGALEKKLVVQEGEEWRLVSCIWLHAGAIHLIANMLSLLFIGVKLEQEFGFLRIGLL 153

Query: 531 XXXXXXXXXXXXXVHSNQSTKIGASSIPXXXXXXXXXXXXXXXXSELITNWTIYANKCXX 352
                        +H  +S  +GAS                   SEL  NWTIYANKC  
Sbjct: 154 YVISGFGGSLLSALHLQKSISVGASGA--------LFGLLGAMLSELFMNWTIYANKCAA 205

Query: 351 XXXXXXXXXLNMAVGFIPNVDTSAHVXXXXXXXXXXXXXLVRPQFGWVSSKHIPPGYNMR 172
                    LN+AVGF+P+VD+SAH+             LVRPQ+G+VS K+IPPGY+ +
Sbjct: 206 LMTLMFVVVLNLAVGFLPHVDSSAHIGGFLSGFLLGFILLVRPQYGYVSRKYIPPGYDGK 265

Query: 171 LLKPKHKSYQYILWITAFVCLTIG 100
            +K KHK YQY+LW+ A V L  G
Sbjct: 266 RVKSKHKWYQYLLWVAALVALIFG 289


>ref|XP_002517616.1| KOM, putative [Ricinus communis] gi|223543248|gb|EEF44780.1| KOM,
           putative [Ricinus communis]
          Length = 303

 Score =  169 bits (429), Expect = 4e-40
 Identities = 94/213 (44%), Positives = 122/213 (57%)
 Frame = -3

Query: 711 LQKVGALILKLVVEEGETWRLISCMWLHAGVIHLLANMISLLFVGIRLEKEFGYWKIXXX 532
           L+++GAL    +V+ GE WR  SC+WLHAGV+HL  NMISLLF+GIRLE+EFG+ +I   
Sbjct: 95  LERLGALDPMAIVKNGEAWRFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFGFLRIGLL 154

Query: 531 XXXXXXXXXXXXXVHSNQSTKIGASSIPXXXXXXXXXXXXXXXXSELITNWTIYANKCXX 352
                        +    S  +GAS                   SEL+ NWTIYANKC  
Sbjct: 155 YVLSGFGGSLMSSLRRKPSISVGASG--------ALLGLLGSMLSELLMNWTIYANKCSA 206

Query: 351 XXXXXXXXXLNMAVGFIPNVDTSAHVXXXXXXXXXXXXXLVRPQFGWVSSKHIPPGYNMR 172
                    LN+A G IP+VD SAH+             L+RPQ+G+VSS++IP GYN++
Sbjct: 207 ISTLLLIIALNLAFGLIPHVDNSAHIGGFLSGFLLGFILLMRPQYGYVSSRYIPVGYNIK 266

Query: 171 LLKPKHKSYQYILWITAFVCLTIGYIVSLASLF 73
             K KHK YQY+L ITA V L +GYI  LA+L+
Sbjct: 267 -KKSKHKCYQYLLLITALVVLIVGYIWGLAALY 298


>emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
          Length = 391

 Score =  168 bits (425), Expect = 1e-39
 Identities = 88/212 (41%), Positives = 119/212 (56%)
 Frame = -3

Query: 711 LQKVGALILKLVVEEGETWRLISCMWLHAGVIHLLANMISLLFVGIRLEKEFGYWKIXXX 532
           L+K+GAL +  VV   + WRLISC+WLHAGV H+LANM+SL+F+GIRLE+EFG+ +I   
Sbjct: 114 LEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLL 173

Query: 531 XXXXXXXXXXXXXVHSNQSTKIGASSIPXXXXXXXXXXXXXXXXSELITNWTIYANKCXX 352
                        +    S  +GAS                   SELITNWTIYANK   
Sbjct: 174 YVVSGFGGSMLSSLFIQSSISVGASGA--------LFGLLGGMLSELITNWTIYANKFAA 225

Query: 351 XXXXXXXXXLNMAVGFIPNVDTSAHVXXXXXXXXXXXXXLVRPQFGWVSSKHIPPGYNMR 172
                    +N+AVG +P+VD  AH+             L+RPQFGWVS ++  PG+   
Sbjct: 226 LLTLILIIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAX 285

Query: 171 LLKPKHKSYQYILWITAFVCLTIGYIVSLASL 76
            +KPKHK YQY+LW+ + + LT+G+ V +  L
Sbjct: 286 SVKPKHKMYQYVLWVMSLILLTVGFTVGMVML 317


>emb|CBI16118.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  167 bits (424), Expect = 2e-39
 Identities = 88/212 (41%), Positives = 119/212 (56%)
 Frame = -3

Query: 711 LQKVGALILKLVVEEGETWRLISCMWLHAGVIHLLANMISLLFVGIRLEKEFGYWKIXXX 532
           L+K+GAL +  VV   + WRLISC+WLHAGV H+LANM+SL+F+GIRLE+EFG+ +I   
Sbjct: 39  LEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLL 98

Query: 531 XXXXXXXXXXXXXVHSNQSTKIGASSIPXXXXXXXXXXXXXXXXSELITNWTIYANKCXX 352
                        +    S  +GAS                   SELITNWTIYANK   
Sbjct: 99  YVVSGFGGSMLSSLFIQSSISVGASGA--------LFGLLGGMLSELITNWTIYANKFAA 150

Query: 351 XXXXXXXXXLNMAVGFIPNVDTSAHVXXXXXXXXXXXXXLVRPQFGWVSSKHIPPGYNMR 172
                    +N+AVG +P+VD  AH+             L+RPQFGWVS ++  PG+   
Sbjct: 151 LLTLILIIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAP 210

Query: 171 LLKPKHKSYQYILWITAFVCLTIGYIVSLASL 76
            +KPKHK YQY+LW+ + + LT+G+ V +  L
Sbjct: 211 SVKPKHKMYQYVLWVMSLILLTVGFTVGMVML 242


>ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 391

 Score =  167 bits (424), Expect = 2e-39
 Identities = 88/212 (41%), Positives = 119/212 (56%)
 Frame = -3

Query: 711 LQKVGALILKLVVEEGETWRLISCMWLHAGVIHLLANMISLLFVGIRLEKEFGYWKIXXX 532
           L+K+GAL +  VV   + WRLISC+WLHAGV H+LANM+SL+F+GIRLE+EFG+ +I   
Sbjct: 114 LEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLL 173

Query: 531 XXXXXXXXXXXXXVHSNQSTKIGASSIPXXXXXXXXXXXXXXXXSELITNWTIYANKCXX 352
                        +    S  +GAS                   SELITNWTIYANK   
Sbjct: 174 YVVSGFGGSMLSSLFIQSSISVGASGA--------LFGLLGGMLSELITNWTIYANKFAA 225

Query: 351 XXXXXXXXXLNMAVGFIPNVDTSAHVXXXXXXXXXXXXXLVRPQFGWVSSKHIPPGYNMR 172
                    +N+AVG +P+VD  AH+             L+RPQFGWVS ++  PG+   
Sbjct: 226 LLTLILIIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAP 285

Query: 171 LLKPKHKSYQYILWITAFVCLTIGYIVSLASL 76
            +KPKHK YQY+LW+ + + LT+G+ V +  L
Sbjct: 286 SVKPKHKMYQYVLWVMSLILLTVGFTVGMVML 317


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