BLASTX nr result

ID: Coptis23_contig00035187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035187
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncat...   106   2e-21
ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]...   105   4e-21
ref|XP_002532127.1| leucine-rich repeat containing protein, puta...   104   8e-21
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...   103   2e-20
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...   102   3e-20

>ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncatula]
           gi|355514677|gb|AES96300.1| Nbs-lrr resistance protein
           [Medicago truncatula]
          Length = 1140

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/107 (51%), Positives = 74/107 (69%)
 Frame = -3

Query: 330 AQLIYNDERVVEQFETRIWICVSEDFSVKRLTKMMIESLSEKPCDLVDLDPLQNHLKKLL 151
           AQLI+N ERVV+ FE RIW+CVSEDFS+KR+TK +IE+ S+K C ++DL+ LQ  L+ LL
Sbjct: 212 AQLIFNHERVVKHFEPRIWVCVSEDFSLKRMTKTIIEATSKKSCGILDLETLQTRLQDLL 271

Query: 150 KINKFLHVLXXXXXXXXXXXXKLKCLLCCGVKGSSVIVTTRLQTVVD 10
           +  +FL VL            KL+ +L C  KGSS++VTTRL  V +
Sbjct: 272 QGKRFLLVLDDVWDVKQENWQKLRSVLACRGKGSSILVTTRLLKVAE 318


>ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]
           gi|355514846|gb|AES96469.1| NBS resistance protein
           [Medicago truncatula]
          Length = 1071

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/104 (53%), Positives = 70/104 (67%)
 Frame = -3

Query: 327 QLIYNDERVVEQFETRIWICVSEDFSVKRLTKMMIESLSEKPCDLVDLDPLQNHLKKLLK 148
           QLI+N ERVV  FE RIW+CVSEDFS+KR+TK +IES S   C+ +DL+PLQ  L  LLK
Sbjct: 209 QLIFNHERVVNHFELRIWVCVSEDFSLKRMTKAIIESASGHACEDLDLEPLQRKLLDLLK 268

Query: 147 INKFLHVLXXXXXXXXXXXXKLKCLLCCGVKGSSVIVTTRLQTV 16
             ++L VL            +LK +L CG KG+SV+VTTRL  V
Sbjct: 269 GKRYLLVLDDVWDDEQENWQRLKYVLACGGKGASVLVTTRLPKV 312


>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/105 (49%), Positives = 69/105 (65%)
 Frame = -3

Query: 330 AQLIYNDERVVEQFETRIWICVSEDFSVKRLTKMMIESLSEKPCDLVDLDPLQNHLKKLL 151
           AQL+YNDERV   F+ RIW+CVS +F V+RL K +IES S   C  +DLDPLQ  L+++L
Sbjct: 183 AQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTIIESASGNACPCLDLDPLQRQLQEIL 242

Query: 150 KINKFLHVLXXXXXXXXXXXXKLKCLLCCGVKGSSVIVTTRLQTV 16
              ++L VL            +LK +L CG KGSS+IVTTR++ V
Sbjct: 243 SGKRYLIVLDHVWNGDQDKWDRLKFVLACGSKGSSIIVTTRMEKV 287


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1063

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/105 (52%), Positives = 70/105 (66%)
 Frame = -3

Query: 330 AQLIYNDERVVEQFETRIWICVSEDFSVKRLTKMMIESLSEKPCDLVDLDPLQNHLKKLL 151
           AQL+YN+E V +QF  RIW+CVS DF VKRLT+ +IES+    CDL +LDPLQ  L++ L
Sbjct: 170 AQLVYNEEIVRQQFSLRIWVCVSTDFDVKRLTRAIIESIDGASCDLQELDPLQRCLQQKL 229

Query: 150 KINKFLHVLXXXXXXXXXXXXKLKCLLCCGVKGSSVIVTTRLQTV 16
              KFL VL            +LK +L CG KGS+VIVTTR++ V
Sbjct: 230 NGKKFLLVLDDVWDDYTDWWSQLKEVLRCGSKGSAVIVTTRIEIV 274


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/105 (49%), Positives = 72/105 (68%)
 Frame = -3

Query: 330 AQLIYNDERVVEQFETRIWICVSEDFSVKRLTKMMIESLSEKPCDLVDLDPLQNHLKKLL 151
           AQ+++N E+VV+ FE RIW+CVSEDFS+KR+TK +IE+ S   C+ +DL+PLQ  L  LL
Sbjct: 208 AQVVFNHEKVVKHFELRIWVCVSEDFSLKRMTKGIIEAASGHACEDLDLEPLQRKLLDLL 267

Query: 150 KINKFLHVLXXXXXXXXXXXXKLKCLLCCGVKGSSVIVTTRLQTV 16
           +  ++L VL            +LK +L CG KG+SV+VTTRL  V
Sbjct: 268 RRKRYLLVLDDVWDDGQENWQRLKSVLACGGKGASVLVTTRLPKV 312


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