BLASTX nr result

ID: Coptis23_contig00035152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035152
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521236.1| conserved hypothetical protein [Ricinus comm...    51   8e-12
gb|AAK31281.1|AC079890_17 unknown protein [Oryza sativa Japonica...    50   7e-11
ref|NP_001065384.2| Os10g0561200 [Oryza sativa Japonica Group] g...    50   7e-11
gb|EEC67438.1| hypothetical protein OsI_34644 [Oryza sativa Indi...    50   7e-11
ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524...    51   4e-10

>ref|XP_002521236.1| conserved hypothetical protein [Ricinus communis]
           gi|223539504|gb|EEF41092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score = 51.2 bits (121), Expect(2) = 8e-12
 Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
 Frame = -1

Query: 294 ESLGKDGNLPIHIFVMTDLSEANWIDSYLGKLLKEDT--YKLHILQE 160
           E+L + G  PIHIFVMTDL + NW  SYLG  L +DT  +KLH L+E
Sbjct: 374 ETLKQSGPQPIHIFVMTDLPQGNWTGSYLGD-LADDTKHFKLHFLRE 419



 Score = 43.5 bits (101), Expect(2) = 8e-12
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = -2

Query: 149 DELAVQIAKKIANVEYGLRSSSLFRNLDANKNKK--CRVGILPDILLYLEE 3
           D+L +Q AKK+A  E+GLR  SL  +L+     K  C    LPDILLY+EE
Sbjct: 421 DDLVIQTAKKLATAEHGLRLGSLPISLNGVSKMKMHCSHQKLPDILLYVEE 471


>gb|AAK31281.1|AC079890_17 unknown protein [Oryza sativa Japonica Group]
           gi|18873835|gb|AAL79781.1|AC079874_4 unknown protein
           [Oryza sativa Japonica Group] gi|31433510|gb|AAP55015.1|
           expressed protein [Oryza sativa Japonica Group]
          Length = 538

 Score = 49.7 bits (117), Expect(2) = 7e-11
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = -1

Query: 276 GNLPIHIFVMTDLSEANWIDSYLGKLLKEDTYKLHILQECE 154
           G+ PIH+F+MTDL  ANW  +YL  + K+  YKLH L+E +
Sbjct: 418 GSGPIHMFMMTDLPPANWSKTYLADIAKDGRYKLHTLKESD 458



 Score = 42.0 bits (97), Expect(2) = 7e-11
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -2

Query: 149 DELAVQIAKKIANVEYGLRSSSLFRNLDANKNKKCRVGILPDILLYLEE 3
           DEL  Q A+++   E+G+RS  + +N+ AN  K C    LP+ILLY+EE
Sbjct: 458 DELVAQTAERLMAAEHGVRSGFIPKNI-ANTRKDCDPVQLPEILLYVEE 505


>ref|NP_001065384.2| Os10g0561200 [Oryza sativa Japonica Group]
           gi|222613267|gb|EEE51399.1| hypothetical protein
           OsJ_32459 [Oryza sativa Japonica Group]
           gi|255679634|dbj|BAF27221.2| Os10g0561200 [Oryza sativa
           Japonica Group]
          Length = 503

 Score = 49.7 bits (117), Expect(2) = 7e-11
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = -1

Query: 276 GNLPIHIFVMTDLSEANWIDSYLGKLLKEDTYKLHILQECE 154
           G+ PIH+F+MTDL  ANW  +YL  + K+  YKLH L+E +
Sbjct: 383 GSGPIHMFMMTDLPPANWSKTYLADIAKDGRYKLHTLKESD 423



 Score = 42.0 bits (97), Expect(2) = 7e-11
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -2

Query: 149 DELAVQIAKKIANVEYGLRSSSLFRNLDANKNKKCRVGILPDILLYLEE 3
           DEL  Q A+++   E+G+RS  + +N+ AN  K C    LP+ILLY+EE
Sbjct: 423 DELVAQTAERLMAAEHGVRSGFIPKNI-ANTRKDCDPVQLPEILLYVEE 470


>gb|EEC67438.1| hypothetical protein OsI_34644 [Oryza sativa Indica Group]
          Length = 500

 Score = 49.7 bits (117), Expect(2) = 7e-11
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = -1

Query: 276 GNLPIHIFVMTDLSEANWIDSYLGKLLKEDTYKLHILQECE 154
           G+ PIH+F+MTDL  ANW  +YL  + K+  YKLH L+E +
Sbjct: 380 GSGPIHMFMMTDLPPANWSKTYLADIAKDGRYKLHTLKESD 420



 Score = 42.0 bits (97), Expect(2) = 7e-11
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -2

Query: 149 DELAVQIAKKIANVEYGLRSSSLFRNLDANKNKKCRVGILPDILLYLEE 3
           DEL  Q A+++   E+G+RS  + +N+ AN  K C    LP+ILLY+EE
Sbjct: 420 DELVAQTAERLMAAEHGVRSGFIPKNI-ANTRKDCDPVQLPEILLYVEE 467


>ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524930|gb|AET05384.1| CigA
           protein [Medicago truncatula]
          Length = 486

 Score = 50.8 bits (120), Expect(2) = 4e-10
 Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -1

Query: 291 SLGKDGNLPIHIFVMTDLSEANWIDSYLGKLLKE-DTYKLHILQE 160
           SL + G+LPIHIFVMTDL   NW  +YLG L  +   YK+H L+E
Sbjct: 361 SLMQKGHLPIHIFVMTDLQRNNWTGTYLGDLTGDAHNYKVHFLRE 405



 Score = 38.1 bits (87), Expect(2) = 4e-10
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 DELAVQIAKKIANVEYGLRSSSLFRNLDANKNKK-CRVGILPDILLYLEE 3
           D+L +Q AKK+    YG R      N D+   KK C   ILPD+LLY+E+
Sbjct: 407 DQLVMQAAKKLTTAGYGQR---FIPNSDSRIGKKYCSNQILPDVLLYVEQ 453


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