BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035148
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522626.1| transcription initiation factor tfiid, putat...    47   3e-07
ref|XP_002273712.2| PREDICTED: transcription initiation factor T...    47   4e-07
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...    47   1e-06
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...    47   1e-06
ref|XP_003612586.1| Transcription initiation factor TFIID subuni...    45   5e-06

>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223538102|gb|EEF39713.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +1

Query: 184 NRLLGFMFGNVDNAGDLDVDYL 249
           +RLLGFMFGNVDN+GDLDVDYL
Sbjct: 29  SRLLGFMFGNVDNSGDLDVDYL 50



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 251 DAKEHLAALADKLGS 295
           DAKEHLAALADKLGS
Sbjct: 53  DAKEHLAALADKLGS 67


>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Vitis vinifera]
          Length = 2068

 Score = 47.4 bits (111), Expect(2) = 4e-07
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +1

Query: 184 NRLLGFMFGNVDNAGDLDVDYL 249
           NRLLGFMFGNVD AGDLDVDYL
Sbjct: 28  NRLLGFMFGNVDGAGDLDVDYL 49



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 251 DAKEHLAALADKLG 292
           DAKEHLAALADKLG
Sbjct: 58  DAKEHLAALADKLG 71


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1919

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 184 NRLLGFMFGNVDNAGDLDVDYL 249
           NR LGFMFGNVDN+GDLDVDYL
Sbjct: 28  NRFLGFMFGNVDNSGDLDVDYL 49



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 251 DAKEHLAALADKLG 292
           DAKEHL+ALADKLG
Sbjct: 52  DAKEHLSALADKLG 65


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1910

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +1

Query: 184 NRLLGFMFGNVDNAGDLDVDYL 249
           NR LGFMFGNVDN+GDLDVDYL
Sbjct: 28  NRFLGFMFGNVDNSGDLDVDYL 49



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 251 DAKEHLAALADKLG 292
           DAKEHL+ALADKLG
Sbjct: 52  DAKEHLSALADKLG 65


>ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
           truncatula] gi|355513921|gb|AES95544.1| Transcription
           initiation factor TFIID subunit 1-A [Medicago
           truncatula]
          Length = 2196

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +1

Query: 184 NRLLGFMFGNVDNAGDLDVDYL 249
           N  LGFMFGNVDN+GDLDVDYL
Sbjct: 124 NHFLGFMFGNVDNSGDLDVDYL 145



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 251 DAKEHLAALADKLG 292
           DAKEHL+ALADKLG
Sbjct: 148 DAKEHLSALADKLG 161