BLASTX nr result

ID: Coptis23_contig00035147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035147
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_003550523.1| PREDICTED: uncharacterized protein LOC100788...   236   1e-60
ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263...   236   2e-60
emb|CBI26140.3| unnamed protein product [Vitis vinifera]              236   2e-60
ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245...   233   2e-59

>ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  240 bits (612), Expect = 1e-61
 Identities = 115/145 (79%), Positives = 127/145 (87%)
 Frame = -3

Query: 435 EVINVKGILVSGTGWADSATIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCK 256
           E INVKGI+VS TGWA++ATIDIVYD LHMMGRDDIPVG G VFAM Q DP   A GDCK
Sbjct: 506 EEINVKGIIVSPTGWANAATIDIVYDFLHMMGRDDIPVGLGDVFAMNQSDPVFSAVGDCK 565

Query: 255 YIRAIPHGSGGSLDSDTLYGYARNLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVW 76
           Y++AIPHGSGG LDSDTLYG AR+LPRSPRRYTAENSVK+GAPRDTDHPELRQPLALE+W
Sbjct: 566 YLKAIPHGSGGLLDSDTLYGLARDLPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW 625

Query: 75  QSITNSTLPGSKISILTNGPLSNLA 1
            SI  +  PGSKI+ILTNGPL++LA
Sbjct: 626 DSIVRTLDPGSKITILTNGPLTSLA 650



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
 Frame = -3

Query: 423 VKGILVSGTGWADSAT-IDIVYDILHMMGRDDIPVGRGQVFAMGQ-----PD-------- 286
           ++ + V+   W D+   +  +YDIL+MMGRDD+ VG G    + +     PD        
Sbjct: 62  LEAVTVNTNSWTDAGHGVSQIYDILYMMGRDDVSVGMGGEGGIAEDGHIFPDVGGFLPIV 121

Query: 285 -PSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDH 112
                 AG C+Y +AIP G  G LD D+ YG  R  LP+  R+Y+               
Sbjct: 122 EQGKSTAGGCRYRQAIPVGPRGRLDLDSNYGLRRAFLPQGSRKYS--------------- 166

Query: 111 PELRQPLALEVWQSITNSTLPGSKISILTNGPLSNL 4
             L QP A    Q +    +    I++L  G  +N+
Sbjct: 167 -PLEQPTA----QQVLTEKISAGPITVLITGAHTNI 197


>ref|XP_003550523.1| PREDICTED: uncharacterized protein LOC100788041 [Glycine max]
          Length = 878

 Score =  236 bits (602), Expect = 1e-60
 Identities = 109/145 (75%), Positives = 126/145 (86%)
 Frame = -3

Query: 435 EVINVKGILVSGTGWADSATIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCK 256
           +VI++K I+VS TGW +SATID++YD+LHMMGRDDIPVG G VFAM Q DP  P  G+CK
Sbjct: 521 QVIDLKAIIVSPTGWTNSATIDVIYDLLHMMGRDDIPVGLGDVFAMNQSDPIFPPVGECK 580

Query: 255 YIRAIPHGSGGSLDSDTLYGYARNLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVW 76
           Y++AIPHGSGG LDSDTLYG AR+LPRSPRRYTAENSVKFGAPRDTDHPELRQPLA+EVW
Sbjct: 581 YVKAIPHGSGGLLDSDTLYGLARDLPRSPRRYTAENSVKFGAPRDTDHPELRQPLAMEVW 640

Query: 75  QSITNSTLPGSKISILTNGPLSNLA 1
            S+   T P SKI++LTNGPL+NLA
Sbjct: 641 NSVLQRTKPRSKITVLTNGPLTNLA 665



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
 Frame = -3

Query: 423 VKGILVSGTGWADSA-TIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSP--------- 274
           ++GI +S   W  +   ++ +YD+L+MMGRDD+ VG G    + Q     P         
Sbjct: 55  LEGISISANAWTSAGHAVNQIYDLLYMMGRDDVAVGVGGEGGILQNGTILPNVGGYLPII 114

Query: 273 -----AAGDCKYIRAIPHGSGGSLDSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDH 112
                  G C+Y RAIP G GG LD D  YG  +  LP+  R+YT               
Sbjct: 115 EQGMTTVGGCRYRRAIPVGLGGRLDIDANYGIRKAFLPQGTRKYT--------------- 159

Query: 111 PELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLA 1
             L+QP A    Q +    +    I++L  G  +N+A
Sbjct: 160 -PLQQPTA----QEVLIEKISAGPITLLVIGAHTNIA 191


>ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
          Length = 1054

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/145 (76%), Positives = 127/145 (87%)
 Frame = -3

Query: 435  EVINVKGILVSGTGWADSATIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCK 256
            EVIN+K ILVS TGWA++ATIDI+YD+LHMMGRDDIPVG G V+AM Q DP   + GDCK
Sbjct: 692  EVINLKAILVSPTGWANAATIDIIYDLLHMMGRDDIPVGLGDVYAMNQSDPIFSSVGDCK 751

Query: 255  YIRAIPHGSGGSLDSDTLYGYARNLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVW 76
            Y++AIPHGSGG LDSDTLYG+AR+LPRSPRRYTAENSVKFGAPRDTDHPELRQPLAL+VW
Sbjct: 752  YVKAIPHGSGGFLDSDTLYGFARHLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALDVW 811

Query: 75   QSITNSTLPGSKISILTNGPLSNLA 1
             S+  +   GSKI+ILTNGPL+ LA
Sbjct: 812  DSVLKTLDSGSKITILTNGPLTTLA 836



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
 Frame = -3

Query: 426 NVKGILVSGTGWADSA-TIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSP-------- 274
           +++ I ++   W ++   ++ VYD+L+MMGRDDIPVG G    + +     P        
Sbjct: 223 DLQAITINTNAWTNAGHAVNQVYDLLYMMGRDDIPVGVGGEGGIREDGTILPNVGGYLPI 282

Query: 273 ------AAGDCKYIRAIPHGS-GGSLDSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDT 118
                   G C+Y +AIP G  GG LD D+ YG  +  LP+  R+Y              
Sbjct: 283 IEQGLTTTGGCRYRQAIPKGRYGGILDIDSNYGIRKAFLPQGSRKY-------------- 328

Query: 117 DHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLA 1
            HP L+QP A    Q +   T+    I++   G  +N A
Sbjct: 329 -HP-LQQPTA----QQVMIDTISSGPINVFVIGGHTNFA 361


>emb|CBI26140.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/145 (76%), Positives = 127/145 (87%)
 Frame = -3

Query: 435 EVINVKGILVSGTGWADSATIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCK 256
           EVIN+K ILVS TGWA++ATIDI+YD+LHMMGRDDIPVG G V+AM Q DP   + GDCK
Sbjct: 531 EVINLKAILVSPTGWANAATIDIIYDLLHMMGRDDIPVGLGDVYAMNQSDPIFSSVGDCK 590

Query: 255 YIRAIPHGSGGSLDSDTLYGYARNLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVW 76
           Y++AIPHGSGG LDSDTLYG+AR+LPRSPRRYTAENSVKFGAPRDTDHPELRQPLAL+VW
Sbjct: 591 YVKAIPHGSGGFLDSDTLYGFARHLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALDVW 650

Query: 75  QSITNSTLPGSKISILTNGPLSNLA 1
            S+  +   GSKI+ILTNGPL+ LA
Sbjct: 651 DSVLKTLDSGSKITILTNGPLTTLA 675



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
 Frame = -3

Query: 426 NVKGILVSGTGWADSA-TIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSP-------- 274
           +++ I ++   W ++   ++ VYD+L+MMGRDDIPVG G    + +     P        
Sbjct: 62  DLQAITINTNAWTNAGHAVNQVYDLLYMMGRDDIPVGVGGEGGIREDGTILPNVGGYLPI 121

Query: 273 ------AAGDCKYIRAIPHGS-GGSLDSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDT 118
                   G C+Y +AIP G  GG LD D+ YG  +  LP+  R+Y              
Sbjct: 122 IEQGLTTTGGCRYRQAIPKGRYGGILDIDSNYGIRKAFLPQGSRKY-------------- 167

Query: 117 DHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLA 1
            HP L+QP A    Q +   T+    I++   G  +N A
Sbjct: 168 -HP-LQQPTA----QQVMIDTISSGPINVFVIGGHTNFA 200


>ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245166 [Vitis vinifera]
          Length = 909

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/145 (77%), Positives = 127/145 (87%)
 Frame = -3

Query: 435 EVINVKGILVSGTGWADSATIDIVYDILHMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCK 256
           E I++KGILVS  GWA +ATIDIVYD+LHMMGRDDIPVG G VFA+GQ + + P  GDCK
Sbjct: 523 EQIDLKGILVSPNGWASAATIDIVYDVLHMMGRDDIPVGLGDVFAIGQKEQTFPLFGDCK 582

Query: 255 YIRAIPHGSGGSLDSDTLYGYARNLPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVW 76
           Y +AIP G GG LDSDTLYG+AR+LPRSPRRYTAENSVKFGAPRDTDHPE+RQPLALEVW
Sbjct: 583 YRKAIPLGGGGLLDSDTLYGFARDLPRSPRRYTAENSVKFGAPRDTDHPEVRQPLALEVW 642

Query: 75  QSITNSTLPGSKISILTNGPLSNLA 1
           +SI +ST PGSKI+ LTNGPL+NLA
Sbjct: 643 KSIVDSTDPGSKITYLTNGPLTNLA 667



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 16/106 (15%)
 Frame = -3

Query: 426 NVKGILVSGTGWADSAT-IDIVYDILHMMGRDDIPVG---RGQVFAMGQP---------- 289
           N++ I +S  GW DS   I+ +YD+L MMGRDDIPVG    G +   G            
Sbjct: 67  NLEAITLSANGWCDSGHGINHIYDLLFMMGRDDIPVGVGGEGGILPNGTILPDVGGYLPI 126

Query: 288 -DPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARN-LPRSPRRYT 157
            D  +  AG C+Y +AIP G+ G LD DT+YG  +  LP+  R Y+
Sbjct: 127 IDQGTSTAGGCRYRQAIPMGAKGLLDIDTMYGLRKGFLPQGSRGYS 172


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