BLASTX nr result

ID: Coptis23_contig00035146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035146
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36990.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002272155.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 ...    55   5e-06
ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus com...    55   8e-06

>emb|CBI36990.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +3

Query: 75  TILLEEYNKQCSSVQ*LYSYQVIVQDKSVFSRLIRDVDSDSLIRLNHYPSCKDSMDW 245
           T  ++   + C  +  L    + +QDK VFSR+IRDV SDS+IR+NHYP+ KD  +W
Sbjct: 131 TDYIQGVRELCCEILDLIGEGLWLQDKMVFSRMIRDVHSDSVIRVNHYPAVKDVKEW 187


>ref|XP_002272155.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 [Vitis vinifera]
           gi|147843548|emb|CAN79462.1| hypothetical protein
           VITISV_042495 [Vitis vinifera]
          Length = 333

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +3

Query: 75  TILLEEYNKQCSSVQ*LYSYQVIVQDKSVFSRLIRDVDSDSLIRLNHYPSCKDSMDW 245
           T  ++   + C  +  L    + +QDK VFSR+IRDV SDS+IR+NHYP+ KD  +W
Sbjct: 131 TDYIQGVRELCCEILDLIGEGLWLQDKMVFSRMIRDVHSDSVIRVNHYPAVKDVKEW 187


>ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus communis]
           gi|223545716|gb|EEF47220.1| gibberellin 2-oxidase,
           putative [Ricinus communis]
          Length = 333

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
 Frame = +3

Query: 63  KLHCTI--LLEEYNKQCSSVQ*LYSYQVIVQDKSVFSRLIRDVDSDSLIRLNHYPSC-KD 233
           K  C +   +EE  +    +  L    + ++DK VFSRLIRDV SDS++RLNHYPS  K+
Sbjct: 125 KFSCAVNDYIEEVRELACEILDLLGEGLWMKDKFVFSRLIRDVHSDSVLRLNHYPSAVKE 184

Query: 234 SMDW 245
            MDW
Sbjct: 185 VMDW 188


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