BLASTX nr result

ID: Coptis23_contig00035136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035136
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333399.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002325645.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002325678.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002334047.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002336617.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15

>ref|XP_002333399.1| predicted protein [Populus trichocarpa] gi|222836439|gb|EEE74846.1|
           predicted protein [Populus trichocarpa]
          Length = 968

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 13/109 (11%)
 Frame = -1

Query: 292 NKGLCGQAKALPPCNPSRISVSGKGRS-KFVKILIFCLLGLFSLVIVIVGTL-------- 140
           N G+CG A  L PCN  + S + K +S K V +++  LLG   LVIV++G L        
Sbjct: 568 NMGICGNASGLKPCNLPKSSRTVKRKSNKLVILIVLPLLGSLLLVIVVIGALFILRQRAR 627

Query: 139 --KEETREIRE--NLFRILGYDGRIVYEDIIEATEGFDDQYCIGVGGYG 5
             K E   I +  NLF ILG+DG+++YE+II ATE F+  YCIG GGYG
Sbjct: 628 KRKAEPGNIEQDRNLFTILGHDGKLLYENIIAATEEFNSNYCIGEGGYG 676


>ref|XP_002325645.1| predicted protein [Populus trichocarpa] gi|222862520|gb|EEF00027.1|
            predicted protein [Populus trichocarpa]
          Length = 1163

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 13/110 (11%)
 Frame = -1

Query: 292  NKGLCGQAKALPPCNPSRISVSGKGRS-KFVKILIFCLLGLFSLVIVIVGTL-------- 140
            N G+CG A  L PCN  + S + K +S K V +++  LLG   LV+V++G L        
Sbjct: 762  NMGICGNASGLKPCNLPKSSRTVKRKSNKLVILIVLPLLGSLLLVLVVIGALFILRQRAR 821

Query: 139  --KEETREIRE--NLFRILGYDGRIVYEDIIEATEGFDDQYCIGVGGYGS 2
              K E   I +  NLF ILG+DG+++YE+II ATE F+  YCIG GGYG+
Sbjct: 822  KRKAEPGNIEQDRNLFTILGHDGKLLYENIIAATEEFNSNYCIGEGGYGT 871


>ref|XP_002325678.1| predicted protein [Populus trichocarpa] gi|222862553|gb|EEF00060.1|
            predicted protein [Populus trichocarpa]
          Length = 1227

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 12/109 (11%)
 Frame = -1

Query: 292  NKGLCGQAKALPPCNPSRISVSGKGRS-KFVKILIFCLLGLFSLVIVIVGTLK------- 137
            N G+CG A  L PCN    S + K +S K V +++  LLG   LV V++G L        
Sbjct: 835  NMGICGNASGLKPCNLPTSSKTVKRKSNKLVVLIVLPLLGSLLLVFVVIGALSILCKRAR 894

Query: 136  ----EETREIRENLFRILGYDGRIVYEDIIEATEGFDDQYCIGVGGYGS 2
                E   E   N+F ILG+DG+ +YE+I+EATE F+  YCIG GGYG+
Sbjct: 895  KRNDEPENEQDRNMFTILGHDGKKLYENIVEATEEFNSNYCIGEGGYGT 943


>ref|XP_002334047.1| predicted protein [Populus trichocarpa] gi|222839678|gb|EEE78001.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
 Frame = -1

Query: 292 NKGLCGQAKALPPCN--PSRISVSGKGRSKFVKILIFCLLGLFSLVIVIVGTL------- 140
           N G+CG A  L PCN   SR +V  K  +K V +++  LLG   LV V++G L       
Sbjct: 585 NMGICGNASGLKPCNLPKSRTTVKRKS-NKLVILIVLPLLGSLLLVFVVIGALFIILRQR 643

Query: 139 -----KEETREIRENLFRILGYDGRIVYEDIIEATEGFDDQYCIGVGGYGS 2
                 E   E   N+F ILG+DG+ +YE+I+EATE F+  YCIG GGYG+
Sbjct: 644 ARKRKAEPENEQDRNIFTILGHDGKKLYENIVEATEEFNSNYCIGEGGYGT 694


>ref|XP_002336617.1| predicted protein [Populus trichocarpa] gi|222836342|gb|EEE74749.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 13/107 (12%)
 Frame = -1

Query: 286 GLCGQAKALPPCNPSRISVSGKGRS-KFVKILIFCLLGLFSLVIVIVGTL---------- 140
           G+CG A  L PCN  + S + K +S K V +++  LLG   LVIV++G L          
Sbjct: 2   GICGNASGLKPCNLPKSSRTVKRKSNKLVILIVLPLLGSLLLVIVVIGALFILRQRARKR 61

Query: 139 KEETREIRE--NLFRILGYDGRIVYEDIIEATEGFDDQYCIGVGGYG 5
           K E   I +  NLF ILG+DG+++YE+II ATE F+  YCIG GGYG
Sbjct: 62  KAEPGNIEQDRNLFTILGHDGKLLYENIIAATEEFNSNYCIGEGGYG 108


Top