BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035129
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17313.3| unnamed protein product [Vitis vinifera]               50   3e-09
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...    50   3e-09
gb|ABK24816.1| unknown [Picea sitchensis]                              47   3e-09
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]    50   3e-09
ref|NP_171980.1| high mobility group-box and ARID domain-binding...    51   9e-09

>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +3

Query: 33  NAASGAPESSTPSYRRKRKY-------PDHPKRAISAYNYFFATKCAELKPLHPNTYREI 191
           N     P + T   RR+RK        P HPK   S YN+FFA + A LKPLHP   REI
Sbjct: 261 NNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 320

Query: 192 PGMI 203
             MI
Sbjct: 321 SRMI 324



 Score = 35.8 bits (81), Expect(2) = 3e-09
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 KMSGEEKKVYEEMRDMDKERYQEEMNDYEE 307
           K+   EK VY+E    DKERY+ EM DY E
Sbjct: 330 KLKENEKAVYQEKAVKDKERYRVEMEDYRE 359


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +3

Query: 33  NAASGAPESSTPSYRRKRKY-------PDHPKRAISAYNYFFATKCAELKPLHPNTYREI 191
           N     P + T   RR+RK        P HPK   S YN+FFA + A LKPLHP   REI
Sbjct: 260 NNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 319

Query: 192 PGMI 203
             MI
Sbjct: 320 SRMI 323



 Score = 35.8 bits (81), Expect(2) = 3e-09
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 KMSGEEKKVYEEMRDMDKERYQEEMNDYEE 307
           K+   EK VY+E    DKERY+ EM DY E
Sbjct: 329 KLKENEKAVYQEKAVKDKERYRVEMEDYRE 358


>gb|ABK24816.1| unknown [Picea sitchensis]
          Length = 481

 Score = 46.6 bits (109), Expect(2) = 3e-09
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +3

Query: 81  KRKYPDHPKRAISAYNYFFATKCAELKPLHPNTYREIPGMI 203
           K++ PDHPK   S YN+FFA +  +LK LHP   REI  MI
Sbjct: 286 KKRDPDHPKPNRSGYNFFFAEQHTKLKALHPGKDREISKMI 326



 Score = 39.3 bits (90), Expect(2) = 3e-09
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = +2

Query: 188 DSWNDWSSLAKMSGEEKKVYEEMRDMDKERYQEEMNDYEE 307
           DSWN      K++ E K VY+E+   DKERY+ EM +Y E
Sbjct: 328 DSWN------KLTEEAKAVYQELGLKDKERYKSEMEEYRE 361


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +3

Query: 33  NAASGAPESSTPSYRRKRKY-------PDHPKRAISAYNYFFATKCAELKPLHPNTYREI 191
           N     P + T   RR+RK        P HPK   S YN+FFA + A LKPLHP   REI
Sbjct: 239 NNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 298

Query: 192 PGMI 203
             MI
Sbjct: 299 SRMI 302



 Score = 35.8 bits (81), Expect(2) = 3e-09
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 KMSGEEKKVYEEMRDMDKERYQEEMNDYEE 307
           K+   EK VY+E    DKERY+ EM DY E
Sbjct: 308 KLKENEKAVYQEKAVKDKERYRVEMEDYRE 337


>ref|NP_171980.1| high mobility group-box and ARID domain-binding domain-containing
           protein [Arabidopsis thaliana]
           gi|75192516|sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High
           mobility group B protein 15; AltName:
           Full=Nucleosome/chromatin assembly factor group D 15
           gi|7211978|gb|AAF40449.1|AC004809_7 Contains similarity
           to the high mobility group family PF|00505 [Arabidopsis
           thaliana] gi|56236040|gb|AAV84476.1| At1g04880
           [Arabidopsis thaliana] gi|56790208|gb|AAW30021.1|
           At1g04880 [Arabidopsis thaliana]
           gi|225897878|dbj|BAH30271.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189634|gb|AEE27755.1| high
           mobility group-box and ARID domain-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 448

 Score = 50.8 bits (120), Expect(2) = 9e-09
 Identities = 24/41 (58%), Positives = 28/41 (68%)
 Frame = +3

Query: 81  KRKYPDHPKRAISAYNYFFATKCAELKPLHPNTYREIPGMI 203
           KR+ PDHPK   S YN+FFA + A LKPLHP   R+I  MI
Sbjct: 256 KRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMI 296



 Score = 33.5 bits (75), Expect(2) = 9e-09
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 218 KMSGEEKKVYEEMRDMDKERYQEEMNDYEE 307
           K++ +EK +Y+     DKERY+ EM DY E
Sbjct: 302 KLNEDEKLIYQGKAMEDKERYRTEMEDYRE 331