BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035112
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    44   4e-07
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    37   9e-07
emb|CAB10336.1| splicing factor like protein [Arabidopsis thalia...    59   2e-06
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    57   4e-06
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    39   8e-06

>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 44.3 bits (103), Expect(2) = 4e-07
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +3

Query: 228 WAAPPEEWLKFNVDGSSLGNPGPAGAGAILRNYDGSFILCFAYPL 362
           W  P   W K N DGS  G  G A  G + RN++  F+L +A P+
Sbjct: 35  WKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPI 79



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 385 GMEIAVSKGRASIWVESNSKAAVTAFNSGKNPWQLKQRWRE------LQTKLTLCTITST 546
           G+E+ +  G +++W+E +SK+ V      K   + K+  R+      +  +L  C +T  
Sbjct: 95  GLELVLENGWSNVWLEGDSKSLVDIIVKRKQV-RCKEAQRQVSHINLIMPELQNCVVTHV 153

Query: 547 W*EVNFTADKAANFGVELGTSNSFICDGRPPWVYKWEVPDEI 672
           + E N  ADK A  G +L          + P +++   PD+I
Sbjct: 154 FREGNRAADKLARIGHQL----------QKPKIWRHIPPDDI 185


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 37.4 bits (85), Expect(3) = 9e-07
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
 Frame = +1

Query: 388 MEIAVSKGRASIWVESNSKAAVTAFNSGKN-PWQLKQRWRELQ--TKLTLCTITSTW*EV 558
           ME A       + +E++S   V AFN G   PWQ++ RW+          C+      E 
Sbjct: 277 MEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILREG 336

Query: 559 NFTADKAANFGVELGTSNSFICDGRPPWVY 648
           N  AD  A  G  L    + +    PP++Y
Sbjct: 337 NMVADALAKHGQGLSLYYTQLWTSPPPFIY 366



 Score = 31.2 bits (69), Expect(3) = 9e-07
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 195 VKLVTMSRFLCWAAPPEEWLKFNVDGSSLGNPGPAGAGAILRNYDGSFI 341
           VK VT    + W  P  + +K N DGSS+G       G ++R+ +  F+
Sbjct: 205 VKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFL 253



 Score = 29.6 bits (65), Expect(3) = 9e-07
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 47  VHSLWYLWLERNKYRFQYNAQSPNPLSVMRLAQI 148
           +H++W +W+ERN+  F    Q+   L  + LA++
Sbjct: 142 IHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEV 175


>emb|CAB10336.1| splicing factor like protein [Arabidopsis thaliana]
           gi|7268306|emb|CAB78600.1| splicing factor like protein
           [Arabidopsis thaliana]
          Length = 559

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +3

Query: 210 MSRFLCWAAPPEEWLKFNVDGSSLGNPGPAGAGAILRNYDGSFILCFAYPL 362
           + R + W  PPE W+K + DG+S GNPGPA AG ++R+ DG ++  FA  L
Sbjct: 22  VERHIAWTKPPEGWVKVSTDGASRGNPGPAAAGGVIRDEDGLWVGGFALQL 72


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/48 (56%), Positives = 31/48 (64%)
 Frame = +3

Query: 210 MSRFLCWAAPPEEWLKFNVDGSSLGNPGPAGAGAILRNYDGSFILCFA 353
           + R + W  P E WLK N DG+S GNPG A AG ILR  DGS+I  FA
Sbjct: 620 IERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFA 667


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 38.5 bits (88), Expect(2) = 8e-06
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
 Frame = +1

Query: 388 MEIAVSKGRASIWVESNSKAAVTAFNS-GKNPWQLKQRW---RELQTKLTLCTITSTW*E 555
           +EIA  +   +IW+ES+S   V AF      P +L+ RW   R+L  ++    IT  + E
Sbjct: 284 VEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLLCRMNF-VITHIYRE 342

Query: 556 VNFTADKAANFGVEL 600
            N  ADK A+ G+++
Sbjct: 343 DNRCADKLASKGLDI 357



 Score = 37.4 bits (85), Expect(2) = 8e-06
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 228 WAAPPEEWLKFNVDGSSLGNPGPAGAGAILRNYDGSFILCFAYPLRRGS 374
           W    + W+KFN DG+S      +  G + R+ + +F+ CFA  L  GS
Sbjct: 225 WYNRNQRWIKFNTDGASTAT--SSSCGGVFRDQNANFLSCFAKNLGGGS 271