BLASTX nr result

ID: Coptis23_contig00035109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035109
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632344.1| PREDICTED: uncharacterized protein LOC100853...    85   7e-15
ref|XP_002302100.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002524730.1| hypothetical protein RCOM_0646070 [Ricinus c...    82   6e-14
ref|XP_002876716.1| hypothetical protein ARALYDRAFT_486835 [Arab...    74   9e-12
ref|NP_001143387.1| uncharacterized protein LOC100276025 [Zea ma...    74   9e-12

>ref|XP_003632344.1| PREDICTED: uncharacterized protein LOC100853989 [Vitis vinifera]
          Length = 548

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   QSILNSSTAKGRLIHYHSTLDRLLLKEAGKRNGSGKKVAGHPLTCHRGLGKSDVSEGV-- 175
           QS+L S +AKGRLIHYHSTLD L++KE G+R G  K+ A H         K D    +  
Sbjct: 196 QSLLESCSAKGRLIHYHSTLDSLIIKEMGRRKGFSKQKANH---------KRDQEHPIRN 246

Query: 176 EGTPDRDSNLEHANEVRPCKTSLSNLWQQWHYDYGIFPIL 295
           E T     NL    +        SNLWQQWHYDYGIF +L
Sbjct: 247 EQTAAEFPNLGKTGDAGSYCCDPSNLWQQWHYDYGIFTVL 286


>ref|XP_002302100.1| predicted protein [Populus trichocarpa] gi|222843826|gb|EEE81373.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/98 (46%), Positives = 62/98 (63%)
 Frame = +2

Query: 2   QSILNSSTAKGRLIHYHSTLDRLLLKEAGKRNGSGKKVAGHPLTCHRGLGKSDVSEGVEG 181
           +S+L S TAKGRLIHYHS+LD LL+K +G+R GS KK A     C +   +  +S   + 
Sbjct: 191 RSLLESGTAKGRLIHYHSSLDNLLIKASGRRKGSTKKQA----YCEK--NQVLLSRSEQK 244

Query: 182 TPDRDSNLEHANEVRPCKTSLSNLWQQWHYDYGIFPIL 295
             +R + + + NEV     +  NLWQQWHYDYGIF +L
Sbjct: 245 QSERCNLVANVNEV-GSSGNQGNLWQQWHYDYGIFTVL 281


>ref|XP_002524730.1| hypothetical protein RCOM_0646070 [Ricinus communis]
           gi|223535914|gb|EEF37573.1| hypothetical protein
           RCOM_0646070 [Ricinus communis]
          Length = 444

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   QSILNSSTAKGRLIHYHSTLDRLLLKEAGKRNGSGKKVAGHPLTCHRGLG-KSDVSEGVE 178
           +S+L S TAKGRLIHYHS LD LLL+E G+  GS K  A     C   L  K D  +G  
Sbjct: 190 RSLLESGTAKGRLIHYHSVLDNLLLRETGRSKGSSKNQANSKKDCEHSLNTKQDHLQG-- 247

Query: 179 GTPDRDSNLEHANEVRPCKTSLSNLWQQWHYDYGIFPIL 295
                 +++   N++   K   ++LWQ+WHYDYGIF +L
Sbjct: 248 -----PNSVITGNKIDSYKNQ-ADLWQEWHYDYGIFTVL 280


>ref|XP_002876716.1| hypothetical protein ARALYDRAFT_486835 [Arabidopsis lyrata subsp.
           lyrata] gi|297322554|gb|EFH52975.1| hypothetical protein
           ARALYDRAFT_486835 [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/98 (41%), Positives = 53/98 (54%)
 Frame = +2

Query: 2   QSILNSSTAKGRLIHYHSTLDRLLLKEAGKRNGSGKKVAGHPLTCHRGLGKSDVSEGVEG 181
           +S+L S TAKGRLIHYHS  D+  L+EA  RN SGK+V+                  V+ 
Sbjct: 176 ESLLESCTAKGRLIHYHSAADKCALREAESRNQSGKRVSS--------------KRRVQN 221

Query: 182 TPDRDSNLEHANEVRPCKTSLSNLWQQWHYDYGIFPIL 295
             +++ N      +     S  NLWQQWHYDYGIF +L
Sbjct: 222 AAEQEGNHRSGAGL---SGSHFNLWQQWHYDYGIFTVL 256


>ref|NP_001143387.1| uncharacterized protein LOC100276025 [Zea mays]
           gi|195619490|gb|ACG31575.1| hypothetical protein [Zea
           mays]
          Length = 467

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
 Frame = +2

Query: 2   QSILNSSTAKGRLIHYHSTLDRLLLKE-AGKRNGSGKKVAGHPLTCHRGLGKSDV----- 163
           QSI +  TAK RLIHYHS LD +++++ + KR  S  KVA  P     G     V     
Sbjct: 188 QSITDFGTAKARLIHYHSELDNIVIRDNSAKRKVSASKVAVQPYQSCSGSRSGSVCPCCI 247

Query: 164 --SEGVEGTPDRDSNLEHAN-EVRPCKTSLSNLWQQWHYDYGIFPIL 295
              +G    P  ++N   A+ + +  + SL NLWQ+WHYDYGIF +L
Sbjct: 248 KSEDGTTVMPIEENNSNDASIQGQAAEISLLNLWQEWHYDYGIFTVL 294


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