BLASTX nr result

ID: Coptis23_contig00035106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035106
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 ...   155   4e-36
ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 ...   153   1e-35
ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group] g...   152   2e-35
gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japo...   152   2e-35

>ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|222860880|gb|EEE98422.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/99 (78%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RVCEMDPSTAMASNVPCSLVKWLASFQE-PALLIHLSTDQVYEGLKSFYKEDDETVPVNV 179
           RVCE DP  AM+ NVPCSLV WL+SF+E   LLIHLSTDQVYEG+KSFYKE+DETVPVNV
Sbjct: 91  RVCEKDPDAAMSINVPCSLVNWLSSFEERDTLLIHLSTDQVYEGVKSFYKEEDETVPVNV 150

Query: 180 YGKSKVAAEQFISSNCTNFAILRSSIIYGPQTVSPVTKS 296
           YGKSKVAAEQFIS    N+AILRSSII+GPQT+SPV KS
Sbjct: 151 YGKSKVAAEQFISKTWPNYAILRSSIIFGPQTISPVQKS 189


>ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
           [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed
           protein product [Vitis vinifera]
          Length = 318

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/99 (78%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RVCEMDPSTAMASNVPCSLVKWLASFQEP-ALLIHLSTDQVYEGLKSFYKEDDETVPVNV 179
           R CEMDP+ AM+ NVP SLVKWL SF+E   LLIHLSTDQVYEG+KSFYKE+DETVPVNV
Sbjct: 88  RSCEMDPAAAMSINVPSSLVKWLLSFEESNTLLIHLSTDQVYEGVKSFYKEEDETVPVNV 147

Query: 180 YGKSKVAAEQFISSNCTNFAILRSSIIYGPQTVSPVTKS 296
           YGKSKVAAEQFIS+N +N+AILRSSII GPQ +SPV KS
Sbjct: 148 YGKSKVAAEQFISTNFSNYAILRSSIIIGPQAISPVPKS 186


>ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
           [Brachypodium distachyon]
          Length = 326

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/99 (73%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RVCEMDPSTAMASNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFYKEDDETVPVNV 179
           R CEMDP+ AMA+N+P SLV W  SF    +LLIHLSTDQVYEG+KSFYKE+DET+PVN+
Sbjct: 96  RACEMDPAAAMATNIPSSLVNWSLSFGNSKSLLIHLSTDQVYEGVKSFYKEEDETLPVNM 155

Query: 180 YGKSKVAAEQFISSNCTNFAILRSSIIYGPQTVSPVTKS 296
           YGKSKVA+E+FI+ NC N+AILRSSIIYGPQT+SPV KS
Sbjct: 156 YGKSKVASEKFITENCPNYAILRSSIIYGPQTISPVAKS 194


>ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group]
           gi|48716437|dbj|BAD23044.1| putative
           dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica
           Group] gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza
           sativa Japonica Group] gi|215697942|dbj|BAG92141.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 317

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/99 (75%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RVCEMDPSTAMASNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFYKEDDETVPVNV 179
           R CE DP+ AMA+NVP SLV WL SF  +  LLIHLSTDQVYEG+KSFYKEDDET+PVN+
Sbjct: 87  RQCETDPAAAMATNVPSSLVTWLLSFGNDNTLLIHLSTDQVYEGVKSFYKEDDETLPVNM 146

Query: 180 YGKSKVAAEQFISSNCTNFAILRSSIIYGPQTVSPVTKS 296
           YGKSKVAAE+FI   C+N+AILRSSIIYGPQT+SPV KS
Sbjct: 147 YGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKS 185


>gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japonica Group]
          Length = 386

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/99 (75%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RVCEMDPSTAMASNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFYKEDDETVPVNV 179
           R CE DP+ AMA+NVP SLV WL SF  +  LLIHLSTDQVYEG+KSFYKEDDET+PVN+
Sbjct: 87  RQCETDPAAAMATNVPSSLVTWLLSFGNDNTLLIHLSTDQVYEGVKSFYKEDDETLPVNM 146

Query: 180 YGKSKVAAEQFISSNCTNFAILRSSIIYGPQTVSPVTKS 296
           YGKSKVAAE+FI   C+N+AILRSSIIYGPQT+SPV KS
Sbjct: 147 YGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKS 185


Top