BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035101
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48034.1| unknown [Lotus japonicus]                              270   1e-70
gb|AFK42721.1| unknown [Lotus japonicus]                              264   8e-69
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565...   262   3e-68
emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subu...   261   5e-68
sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carbox...   259   3e-67

>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  270 bits (690), Expect = 1e-70
 Identities = 128/152 (84%), Positives = 139/152 (91%), Gaps = 2/152 (1%)
 Frame = -1

Query: 455 ASMISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 282
           +SMI+S+AVTT+N ASPAQA  VAPFTGLKSMAGFPV K NNDITSIA+NG RV CMQVW
Sbjct: 3   SSMITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQVW 62

Query: 281 PTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDG 102
           P  GKKKFETLSYLPPLT EQL +EV+YLLRKGWVPCLEFE EKGFVYRENH+SPGYYDG
Sbjct: 63  PPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDG 122

Query: 101 RYWTMWKLPMFGCTDSAQVLKELEEAVKAYPN 6
           RYWTMWKLPMFGC+D+ QVLKEL+EAVKAYPN
Sbjct: 123 RYWTMWKLPMFGCSDATQVLKELDEAVKAYPN 154


>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score =  264 bits (674), Expect = 8e-69
 Identities = 128/153 (83%), Positives = 137/153 (89%), Gaps = 3/153 (1%)
 Frame = -1

Query: 455 ASMI-SSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQV 285
           +SMI SS A TT+  ASPAQA  VAPFTGLKSMAGFPV K NNDITSIASNG RV CMQV
Sbjct: 3   SSMITSSAAATTIKGASPAQASMVAPFTGLKSMAGFPVRKANNDITSIASNGGRVQCMQV 62

Query: 284 WPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYD 105
           WP  GKKKFETLSYLPPLT EQL +EV+YLLRKGWVPCLEFE EKGFVYRENH+SPGYYD
Sbjct: 63  WPPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYD 122

Query: 104 GRYWTMWKLPMFGCTDSAQVLKELEEAVKAYPN 6
           GRYWTMWKLPMFGC+D+AQVLKEL+EAV+AYPN
Sbjct: 123 GRYWTMWKLPMFGCSDAAQVLKELDEAVRAYPN 155


>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
           [Lotus japonicus]
          Length = 177

 Score =  262 bits (669), Expect = 3e-68
 Identities = 128/151 (84%), Positives = 137/151 (90%), Gaps = 1/151 (0%)
 Frame = -1

Query: 455 ASMISSTAVTTVNRASPAQAVAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMQVWP 279
           +SMISS AVTTVN A+    VAPFTGLKSMAGFPVT+K NNDITSIASNG RVNCMQVWP
Sbjct: 3   SSMISSPAVTTVNHAN---MVAPFTGLKSMAGFPVTRKANNDITSIASNGGRVNCMQVWP 59

Query: 278 TQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGR 99
             GKKKFETLSYLPPLT EQLA+EV+YL+RKGWVPCLEFE EKGFVYRENH+SPGYYDGR
Sbjct: 60  PIGKKKFETLSYLPPLTVEQLAKEVEYLIRKGWVPCLEFETEKGFVYRENHKSPGYYDGR 119

Query: 98  YWTMWKLPMFGCTDSAQVLKELEEAVKAYPN 6
           YWTMWKLPMFG TD++QVLKELEEA KAYPN
Sbjct: 120 YWTMWKLPMFGTTDASQVLKELEEAKKAYPN 150


>emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subunit [Cicer
           arietinum]
          Length = 181

 Score =  261 bits (667), Expect = 5e-68
 Identities = 125/152 (82%), Positives = 137/152 (90%), Gaps = 2/152 (1%)
 Frame = -1

Query: 455 ASMISSTAVTTVNRAS--PAQAVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 282
           +SMISS+AVTTV RAS  P+ AVAPF GLKSMAGFPV K NNDITSIASNG RV+CMQVW
Sbjct: 3   SSMISSSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVW 62

Query: 281 PTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDG 102
           P  GKKKFETLSYLPPLT EQL +EV+YLLRKGWVPCLEFELEKGFVYRE++ SPGYYDG
Sbjct: 63  PPIGKKKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDG 122

Query: 101 RYWTMWKLPMFGCTDSAQVLKELEEAVKAYPN 6
           RYWTMWKLP+FGCT++ QVLKEL+E VKAYPN
Sbjct: 123 RYWTMWKLPLFGCTEAVQVLKELQEVVKAYPN 154


>sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1079738|gb|AAA82070.1| ribulose
           1,5-bisphosphate carboxylase/oxygenase small subunit
           precursor [Glycine tomentella]
          Length = 178

 Score =  259 bits (661), Expect = 3e-67
 Identities = 124/151 (82%), Positives = 132/151 (87%)
 Frame = -1

Query: 455 ASMISSTAVTTVNRASPAQAVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVWPT 276
           +SMISS AVTTVNRA  A  VAPFTGLKSMAGFP  K NNDI SIASNG RV CMQVWPT
Sbjct: 3   SSMISSPAVTTVNRAG-AGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWPT 61

Query: 275 QGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRY 96
            GKKKFETLSYLP L   QLA+EV+YLLRKGW+PCLEFELE GFVYRENHRSPGYYDGRY
Sbjct: 62  TGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRY 121

Query: 95  WTMWKLPMFGCTDSAQVLKELEEAVKAYPNG 3
           WTMWKLP+FGCTD++QVLKEL+EA  AYPNG
Sbjct: 122 WTMWKLPVFGCTDASQVLKELQEAKTAYPNG 152