BLASTX nr result

ID: Coptis23_contig00035094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035094
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513279.1| Protein regulator of cytokinesis, putative [...   105   3e-21
ref|XP_002267584.1| PREDICTED: 65-kDa microtubule-associated pro...    85   7e-15
ref|NP_001043901.1| Os01g0685900 [Oryza sativa Japonica Group] g...    78   9e-13
ref|XP_003622331.1| Protein regulator of cytokinesis [Medicago t...    74   1e-11
ref|NP_001130355.1| uncharacterized protein LOC100191450 [Zea ma...    72   4e-11

>ref|XP_002513279.1| Protein regulator of cytokinesis, putative [Ricinus communis]
           gi|223547653|gb|EEF49147.1| Protein regulator of
           cytokinesis, putative [Ricinus communis]
          Length = 724

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/141 (46%), Positives = 77/141 (54%), Gaps = 31/141 (21%)
 Frame = +3

Query: 9   LSAGRRGLDIAGLPSKKHSFNSVNAREPESPVTRKPFSPVYSNNNS-------------- 146
           LSAGRRGLDIAGLP+KKH F++VNA EPESP+ RKPFSP+ S  +S              
Sbjct: 574 LSAGRRGLDIAGLPAKKHPFSTVNAHEPESPMLRKPFSPISSTGSSKANILEDVTTAHGE 633

Query: 147 --------------VVDEENRTPKVR-IXXXXXXXXXXXXMQMAATPAPPVAVLFPAT-- 275
                         + DEEN TPK   I            MQ A TPA PV V +     
Sbjct: 634 TIKKIVTTTPSKTTMADEENWTPKTMPIPVPTTPSTLSVPMQTAITPAHPVPVPYGGATP 693

Query: 276 KVEVTPDIEYSFEERRAGFIL 338
           K EV  ++EYSFEERRAGF+L
Sbjct: 694 KEEVPEEVEYSFEERRAGFVL 714


>ref|XP_002267584.1| PREDICTED: 65-kDa microtubule-associated protein 3 [Vitis vinifera]
            gi|296084125|emb|CBI24513.3| unnamed protein product
            [Vitis vinifera]
          Length = 730

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 67/154 (43%), Positives = 74/154 (48%), Gaps = 42/154 (27%)
 Frame = +3

Query: 3    TGLSAGRRGLDIAGLPSKKHSFNSVNAREPESPVTRKPFSPV------------------ 128
            T LSAG RGLDIAGLP KK SF   N RE +SP+ RKPFSP+                  
Sbjct: 572  TALSAGTRGLDIAGLPIKKQSF---NPREIDSPMMRKPFSPISSTASSEANTMLEDLNRP 628

Query: 129  --------YSNNN--------------SVVDEENRTPK-VRIXXXXXXXXXXXXMQMAAT 239
                     S+NN              S  DEENRTPK + I            M  A T
Sbjct: 629  QPKILHKTVSSNNIPYTTPSKSQLPPPSATDEENRTPKTMPIPVPSTPSTVSVPMLTAMT 688

Query: 240  PAPPVA-VLFPATKVEVTPDIEYSFEERRAGFIL 338
            PAPP A V + A  VE T   EYSFEERRAGF+L
Sbjct: 689  PAPPPAPVPYNANPVEET---EYSFEERRAGFVL 719


>ref|NP_001043901.1| Os01g0685900 [Oryza sativa Japonica Group]
           gi|56784993|dbj|BAD82523.1| microtubule-associated
           protein-like [Oryza sativa Japonica Group]
           gi|113533432|dbj|BAF05815.1| Os01g0685900 [Oryza sativa
           Japonica Group] gi|215686717|dbj|BAG88970.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218188865|gb|EEC71292.1| hypothetical protein
           OsI_03306 [Oryza sativa Indica Group]
           gi|222619065|gb|EEE55197.1| hypothetical protein
           OsJ_03043 [Oryza sativa Japonica Group]
          Length = 689

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 54/129 (41%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
 Frame = +3

Query: 9   LSAGRRGLDIAGLPSKKHSFNSVNAREPESPVTRKPF-----------SPVYSNNNSVVD 155
           LS   RGLDIAGLP KK SFN+   RE E+P  RKPF           +PV    N+  D
Sbjct: 558 LSPSSRGLDIAGLPIKKLSFNASTLRETETP--RKPFAQITPGNSVSSTPVRPITNNTED 615

Query: 156 EENRTPKV-RIXXXXXXXXXXXXMQMAATP-------APPVAVLFPATKVEVTPDIEYSF 311
           +ENRTPK                MQMA TP       A PV++++   +V +  DI+YSF
Sbjct: 616 DENRTPKTFTALNPKTPMTVTAPMQMAMTPSLANKVSATPVSLVYDKPEVTLQEDIDYSF 675

Query: 312 EERRAGFIL 338
           EERR    L
Sbjct: 676 EERRLAIYL 684


>ref|XP_003622331.1| Protein regulator of cytokinesis [Medicago truncatula]
            gi|355497346|gb|AES78549.1| Protein regulator of
            cytokinesis [Medicago truncatula]
          Length = 729

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 56/164 (34%), Positives = 71/164 (43%), Gaps = 54/164 (32%)
 Frame = +3

Query: 9    LSAGRRGLDIAGLPSKKHSFNSVNAREPESPVTRKPFSPVYSNNNS-------------- 146
            LS+ RRGLDIAG+P+KKHS  + +A E  SP+TR+PFSP+ SNN S              
Sbjct: 568  LSSARRGLDIAGIPAKKHSLGAASAYELXSPLTRQPFSPLSSNNVSSKANVANAANEHIM 627

Query: 147  ------------------------VVDEENRTPK-VRIXXXXXXXXXXXXMQMAATPAPP 251
                                    V D+EN+TPK + I            M MA TP P 
Sbjct: 628  QSEKFPKTMALNNVPFVSPCKAMTVTDQENKTPKAMPIPIPPTPSTVSIPMNMAVTPVPS 687

Query: 252  VAVLFPATKVEVTP---------------DIEYSFEERRAGFIL 338
                  +  V VTP               +IEYSFEERR  + +
Sbjct: 688  SV----SMNVAVTPVPSSATVGCNVIPVQEIEYSFEERRLAYYM 727


>ref|NP_001130355.1| uncharacterized protein LOC100191450 [Zea mays]
           gi|194688922|gb|ACF78545.1| unknown [Zea mays]
           gi|413950946|gb|AFW83595.1| hypothetical protein
           ZEAMMB73_552543 [Zea mays] gi|413950947|gb|AFW83596.1|
           hypothetical protein ZEAMMB73_552543 [Zea mays]
          Length = 689

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 54/130 (41%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
 Frame = +3

Query: 9   LSAGRRGLDIAGLPSKKHSFNSVNAREPESPVTRKPFSPVYSNNN----------SVVDE 158
           LS   RGLDIAGLP KK SFN+   RE E+P  RKPF+ +   NN          S  +E
Sbjct: 557 LSPSSRGLDIAGLPIKKLSFNASTLREAETP--RKPFAQIMPGNNVSPMPTRPISSATEE 614

Query: 159 ENRTPKVRI--XXXXXXXXXXXXMQMAATPAPPVAVL-FPATKVE-------VTPDIEYS 308
           EN+TP+  +              MQMA TPA    V+  PAT  +       +  DIEYS
Sbjct: 615 ENKTPRTFVGGLNAKTPATVTAPMQMAMTPAVANKVIATPATLFQEKADSPALPADIEYS 674

Query: 309 FEERRAGFIL 338
           FEERR    L
Sbjct: 675 FEERRLAVYL 684


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