BLASTX nr result

ID: Coptis23_contig00035092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035092
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328652.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|ABK92466.1| unknown [Populus trichocarpa]                           79   3e-13
ref|XP_002317918.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002269355.1| PREDICTED: probable serine/threonine-protein...    76   2e-12
emb|CAN66918.1| hypothetical protein VITISV_043041 [Vitis vinifera]    76   2e-12

>ref|XP_002328652.1| predicted protein [Populus trichocarpa] gi|222838828|gb|EEE77179.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -3

Query: 388 PPYPEALHQFITWTLQPQAAVRPRINDIIFHVDKLISKFT 269
           PPYPEALHQF+TW LQPQAAVRPRI+DII HVDKLISKF+
Sbjct: 310 PPYPEALHQFVTWMLQPQAAVRPRIDDIIIHVDKLISKFS 349


>gb|ABK92466.1| unknown [Populus trichocarpa]
          Length = 350

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -3

Query: 388 PPYPEALHQFITWTLQPQAAVRPRINDIIFHVDKLISKFT 269
           PPYPEALHQF+TW LQPQAAVRPRI+DII HVDKLISKF+
Sbjct: 310 PPYPEALHQFVTWMLQPQAAVRPRIDDIIIHVDKLISKFS 349


>ref|XP_002317918.1| predicted protein [Populus trichocarpa] gi|222858591|gb|EEE96138.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 388 PPYPEALHQFITWTLQPQAAVRPRINDIIFHVDKLISKFT 269
           PPYPEALHQF+TW LQPQAAVRP I+DII HVDKLISKF+
Sbjct: 312 PPYPEALHQFVTWMLQPQAAVRPHIDDIIIHVDKLISKFS 351


>ref|XP_002269355.1| PREDICTED: probable serine/threonine-protein kinase DDB_G0291350
           isoform 1 [Vitis vinifera] gi|297734124|emb|CBI15371.3|
           unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -3

Query: 388 PPYPEALHQFITWTLQPQAAVRPRINDIIFHVDKLISKF 272
           PPYPEALHQF+TW LQPQA VRPRI+DII HVDKLI+KF
Sbjct: 301 PPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKF 339


>emb|CAN66918.1| hypothetical protein VITISV_043041 [Vitis vinifera]
          Length = 341

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -3

Query: 388 PPYPEALHQFITWTLQPQAAVRPRINDIIFHVDKLISKF 272
           PPYPEALHQF+TW LQPQA VRPRI+DII HVDKLI+KF
Sbjct: 301 PPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKF 339


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