BLASTX nr result

ID: Coptis23_contig00035069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035069
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527660.1| ring finger protein, putative [Ricinus commu...   137   1e-30
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   134   6e-30
gb|EAY95377.1| hypothetical protein OsI_17210 [Oryza sativa Indi...   132   2e-29
ref|XP_003580469.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   132   3e-29
ref|XP_003581592.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   130   9e-29

>ref|XP_002527660.1| ring finger protein, putative [Ricinus communis]
           gi|223532965|gb|EEF34731.1| ring finger protein,
           putative [Ricinus communis]
          Length = 578

 Score =  137 bits (344), Expect = 1e-30
 Identities = 59/78 (75%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   PCKHFYCCKCMETYSRIHVKEGTVYKLICPDAKCDGLVPPGLLERLLASEDFERWEWLVL 180
           PC+HF+CC CM+TY  IHV EGTV KL CPDAKC G+VPPGLL++LL  E++ERWE L+L
Sbjct: 218 PCQHFFCCTCMKTYCGIHVTEGTVNKLQCPDAKCGGMVPPGLLKQLLGDEEYERWESLML 277

Query: 181 QKTLDSMSDVAYCPRCET 234
           QKTLDSMSDVAYCPRCET
Sbjct: 278 QKTLDSMSDVAYCPRCET 295


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score =  134 bits (338), Expect = 6e-30
 Identities = 58/78 (74%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   PCKHFYCCKCMETYSRIHVKEGTVYKLICPDAKCDGLVPPGLLERLLASEDFERWEWLVL 180
           PCKH++C KCMETYS +HVKEGTV KL CPDAKCD +VPPGLL++LL  E+FERWE ++L
Sbjct: 350 PCKHYFCWKCMETYSSMHVKEGTVSKLNCPDAKCDVMVPPGLLKQLLGDEEFERWESMML 409

Query: 181 QKTLDSMSDVAYCPRCET 234
            KTL+SMSDV YCPRCET
Sbjct: 410 TKTLESMSDVVYCPRCET 427


>gb|EAY95377.1| hypothetical protein OsI_17210 [Oryza sativa Indica Group]
          Length = 547

 Score =  132 bits (333), Expect = 2e-29
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   PCKHFYCCKCMETYSRIHVKEGTVYKLICPDAKCDGLVPPGLLERLLASEDFERWEWLVL 180
           PC H++C +CMETYSR+HV EGTV KL+CP+ KC G++PPGLL+R+L  +DFERWE L L
Sbjct: 253 PCGHYFCQRCMETYSRMHVAEGTVLKLLCPNDKCGGIIPPGLLKRMLGDKDFERWERLTL 312

Query: 181 QKTLDSMSDVAYCPRCET 234
           QKTLDSMSDVAYCPRC T
Sbjct: 313 QKTLDSMSDVAYCPRCVT 330


>ref|XP_003580469.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Brachypodium
           distachyon]
          Length = 552

 Score =  132 bits (332), Expect = 3e-29
 Identities = 55/78 (70%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   PCKHFYCCKCMETYSRIHVKEGTVYKLICPDAKCDGLVPPGLLERLLASEDFERWEWLVL 180
           PC+H++C  CM TY+R+HVKEG+V KL+CPD KC G+VPP LL+RLL + DFERWE L+L
Sbjct: 255 PCRHYFCLSCMGTYTRMHVKEGSVLKLVCPDNKCGGVVPPDLLKRLLGNADFERWERLIL 314

Query: 181 QKTLDSMSDVAYCPRCET 234
           QKTLDSMSDV YCPRC+T
Sbjct: 315 QKTLDSMSDVVYCPRCQT 332


>ref|XP_003581592.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Brachypodium
           distachyon]
          Length = 633

 Score =  130 bits (328), Expect = 9e-29
 Identities = 52/78 (66%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   PCKHFYCCKCMETYSRIHVKEGTVYKLICPDAKCDGLVPPGLLERLLASEDFERWEWLVL 180
           PC HF+C KCM+TY ++HVKEGTV KL+CPD KC G+VPP +L+RLL  ++FERWE L+L
Sbjct: 347 PCHHFFCQKCMQTYCKMHVKEGTVVKLLCPDTKCQGIVPPNILKRLLGKDEFERWEGLLL 406

Query: 181 QKTLDSMSDVAYCPRCET 234
           Q+TLD+M+DV YCPRC+T
Sbjct: 407 QRTLDAMADVVYCPRCQT 424


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