BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035050
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003616648.1| F-box protein SKIP23 [Medicago truncatula] g...    65   8e-09
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = -1

Query: 285 VITDRLVNIEDYIRFGAVCRSWQCVYTYNKHWHRCHSPCQLPMLMIP-------NRCFYS 127
           VI D+  N  DY+   AVC SWQ       H H     CQLP L++P        R FY+
Sbjct: 15  VIADKHTNYVDYLVTRAVCGSWQSAIAKRPHNHLL---CQLPFLLLPYYQNNPDRRGFYN 71

Query: 126 ICDKKTH--NFPSPFIDKCCRSSSEGWLVTVHNTSAVHLINP 7
           I D K +    P  +  +CC  SS GWL+ V ++ ++ L+NP
Sbjct: 72  ISDDKIYVLELPEAYEKRCC-GSSHGWLIMVEDSPSIFLLNP 112


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
 Frame = -1

Query: 282 ITDRLVNIEDYIRFGAVCRSWQCVYTYNKHWHRCHSPCQLPMLMIP-------NRCFYSI 124
           IT +  N  DYI   AVC+SW        H       CQLP L++P       +R FY++
Sbjct: 15  ITQKQSNYVDYISTRAVCKSWWSAIPKKPH----DLLCQLPWLLLPYHKNNPNHRGFYNL 70

Query: 123 CDKKTHNFPSP-FIDKCCRSSSEGWLVTVHNTSAVHLINP 7
            D KT++   P  I+K C  SS GWLV V +T ++ L+NP
Sbjct: 71  ADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNP 110


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
 Frame = -1

Query: 285 VITDRLVNIEDYIRFGAVCRSWQCVYTYNKHWHRCHSPCQLPMLMIP-------NRCFYS 127
           +IT +  N  DY+   AVC+SW+       H       CQLP L++P       +R FY+
Sbjct: 14  LITQKQTNYVDYLCVRAVCKSWRSALPKKPH----DLLCQLPWLLLPYQNDSPNHRGFYN 69

Query: 126 ICDKKTHNF--PSPFIDKCCRSSSEGWLVTVHNTSAVHLINP 7
           + D KT+    P  +  +CC  SS GWLV V  T A+ L+NP
Sbjct: 70  LADGKTYRLELPEAYEKRCC-GSSHGWLVMVEETPAIFLLNP 110


>ref|XP_003616648.1| F-box protein SKIP23 [Medicago truncatula]
           gi|355517983|gb|AES99606.1| F-box protein SKIP23
           [Medicago truncatula]
          Length = 291

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
 Frame = -1

Query: 285 VITDRLVNIEDYIRFGAVCRSWQCVYTYNKHWHRCHSPCQLPMLMIP--NRCFYSICDKK 112
           +I D+L    D++ FGAVC++W+ +  +N H ++      LPMLMIP  N C YSI  K+
Sbjct: 15  LILDKLEERIDHVWFGAVCKNWRSIAKFN-HQNQQFRTHVLPMLMIPRTNICLYSIPAKR 73

Query: 111 THNFPSPFID---KCCRSSSEGWLVTVHNTSAVHLINPF 4
            + F  P I+    CC  +S GWL        V ++NPF
Sbjct: 74  MYAFKFPIINYKITCC-GNSHGWLALEDRNHVVTILNPF 111


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
 Frame = -1

Query: 282 ITDRLVNIEDYIRFGAVCRSWQCVYTYNKHWHRCHSPCQLPMLMIPN-------RCFYSI 124
           IT +  N  DYI   AVC+SW        H       C+LP L++P+       R FY+ 
Sbjct: 15  ITQKQTNYVDYISTRAVCKSWWSAIPKKPH----DLLCRLPWLLLPHHKDNPNHRGFYNP 70

Query: 123 CDKKTHNFPSP-FIDKCCRSSSEGWLVTVHNTSAVHLINP 7
            D KT++   P  +DK C  SS GWLV V +T ++ L+NP
Sbjct: 71  SDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNP 110