BLASTX nr result

ID: Coptis23_contig00035043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035043
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...   165   4e-39
emb|CBI36110.3| unnamed protein product [Vitis vinifera]              165   4e-39
emb|CBI20867.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g...   160   1e-37

>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 3/131 (2%)
 Frame = +3

Query: 3   ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
           +L+S+F +YYAS  +S +I+LT IVYIQDHLGWK+GFG+P ILM LSAL FFF  P YV+
Sbjct: 65  VLESFFGWYYASAAISVLISLTAIVYIQDHLGWKVGFGVPAILMFLSALLFFFASPFYVK 124

Query: 183 VNANKSLFTGLAQVVAVTFKNRSLAYP---VDGKYHYSKESNLVTPSKKLRFLNKACIIR 353
              +KSLFTG  QV  V +KNR LA+P    DG YH+ ++S  + P+ KLRFLNKACIIR
Sbjct: 125 QKPSKSLFTGFIQVPVVAYKNRKLAFPPRDSDGWYHHKRDSKFIAPTTKLRFLNKACIIR 184

Query: 354 DPENDITPDGS 386
           +PE DI  DGS
Sbjct: 185 NPEQDIASDGS 195


>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/130 (60%), Positives = 97/130 (74%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
           +L+S+FS+YYAS  LS VIALT IVYIQ HLGW++GFG+P ILM  +AL FF   P Y++
Sbjct: 174 VLESFFSWYYASAALSVVIALTGIVYIQVHLGWRVGFGVPAILMFFAALLFFLASPFYIK 233

Query: 183 VNANKSLFTGLAQVVAVTFKNRSLAYP---VDGKYHYSKESNLVTPSKKLRFLNKACIIR 353
             A++SL TG  QV+ V +KNR LA+P    DG YHYSK+S LV P+ +LRFLNKACIIR
Sbjct: 234 QKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDGWYHYSKDSKLVVPTDRLRFLNKACIIR 293

Query: 354 DPENDITPDG 383
            PE DI  DG
Sbjct: 294 SPERDINSDG 303


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/130 (60%), Positives = 97/130 (74%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
           +L+S+FS+YYAS  LS VIALT IVYIQ HLGW++GFG+P ILM  +AL FF   P Y++
Sbjct: 174 VLESFFSWYYASAALSVVIALTGIVYIQVHLGWRVGFGVPAILMFFAALLFFLASPFYIK 233

Query: 183 VNANKSLFTGLAQVVAVTFKNRSLAYP---VDGKYHYSKESNLVTPSKKLRFLNKACIIR 353
             A++SL TG  QV+ V +KNR LA+P    DG YHYSK+S LV P+ +LRFLNKACIIR
Sbjct: 234 QKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDGWYHYSKDSKLVVPTDRLRFLNKACIIR 293

Query: 354 DPENDITPDG 383
            PE DI  DG
Sbjct: 294 SPERDINSDG 303


>emb|CBI20867.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/130 (59%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3    ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
            +LQS+F++YYASIG+STVIALT I YIQDHLGWK GFG+PVILM+ SAL F  G  LY++
Sbjct: 774  VLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGVPVILMVFSALMFVLGSSLYIR 833

Query: 183  VNANKSLFTGLAQVVAVTFKNRSLAYPVD--GKYHYSKESNLVTPSKKLRFLNKACIIRD 356
            V   K+L TG  QV+ V FKNR L  P D  G Y++S +   + P+ +LR LNKACIIRD
Sbjct: 834  VKPGKNLLTGFVQVLVVAFKNRCLTLPTDSVGYYNHSSDPKFLAPTSELRCLNKACIIRD 893

Query: 357  PENDITPDGS 386
            P  D+  DGS
Sbjct: 894  PNRDLNSDGS 903



 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
           IL S+F++YYAS  +STVI+LT+IVYIQDHLGW  GFG+P ILM  SAL F FG  LYV+
Sbjct: 184 ILDSFFNWYYASSAMSTVISLTIIVYIQDHLGWNFGFGVPAILMFFSALMFLFGSSLYVK 243

Query: 183 VNANKSLFTGLAQVVAVTFKNRSLAYPVDGK--YHYSKESNLVTPSKKLRFLNKACIIRD 356
              + SLFTG  QV  V FKNR L  P D    YH+S +  L TP+ +LR+LN+AC+IRD
Sbjct: 244 EKPSSSLFTGFVQVPFVAFKNRHLNPPCDSDEYYHHSHDKKL-TPTNQLRWLNRACMIRD 302

Query: 357 PENDITPDGS 386
           P  D++ DGS
Sbjct: 303 PGRDLSSDGS 312


>ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g52190 [Vitis vinifera]
          Length = 592

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/130 (59%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   ILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGIPVILMLLSALTFFFGYPLYVQ 182
           +LQS+F++YYASIG+STVIALT I YIQDHLGWK GFG+PVILM+ SAL F  G  LY++
Sbjct: 185 VLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGVPVILMVFSALMFVLGSSLYIR 244

Query: 183 VNANKSLFTGLAQVVAVTFKNRSLAYPVD--GKYHYSKESNLVTPSKKLRFLNKACIIRD 356
           V   K+L TG  QV+ V FKNR L  P D  G Y++S +   + P+ +LR LNKACIIRD
Sbjct: 245 VKPGKNLLTGFVQVLVVAFKNRCLTLPTDSVGYYNHSSDPKFLAPTSELRCLNKACIIRD 304

Query: 357 PENDITPDGS 386
           P  D+  DGS
Sbjct: 305 PNRDLNSDGS 314


Top