BLASTX nr result

ID: Coptis23_contig00035042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035042
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   207   7e-52
ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...   202   2e-50
ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   197   8e-49
ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   197   8e-49

>ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor
           MCM8-like [Vitis vinifera]
          Length = 754

 Score =  207 bits (527), Expect = 7e-52
 Identities = 95/113 (84%), Positives = 107/113 (94%)
 Frame = -1

Query: 339 DGKFSPPTTCIIQGCKSRTFCPIRNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELT 160
           DGKFSPP+ C + GCKSRTF PIR++A+PIDFQKIR+QE+L+SENHEEGRVPRTVECELT
Sbjct: 184 DGKFSPPSVCTLHGCKSRTFTPIRSTAQPIDFQKIRLQEILKSENHEEGRVPRTVECELT 243

Query: 159 EDLVDVCIPGDVVTVTGIIKVINNYMDVGGGKSKNKNQGLYYLYLEAVSVKNS 1
           EDLVD CIPGDVVTVTGII+ INNYMD+GGGKSKNKNQGL+YLYLEAVS+KNS
Sbjct: 244 EDLVDACIPGDVVTVTGIIRQINNYMDIGGGKSKNKNQGLFYLYLEAVSIKNS 296


>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score =  202 bits (514), Expect = 2e-50
 Identities = 94/114 (82%), Positives = 104/114 (91%)
 Frame = -1

Query: 342 PDGKFSPPTTCIIQGCKSRTFCPIRNSARPIDFQKIRIQELLRSENHEEGRVPRTVECEL 163
           PDGKFSPPT C + GCKS+TF PIR+SA+ IDFQKIRIQELLRSE+HEEGRVPRTVECEL
Sbjct: 190 PDGKFSPPTICNLNGCKSKTFHPIRSSAQAIDFQKIRIQELLRSEDHEEGRVPRTVECEL 249

Query: 162 TEDLVDVCIPGDVVTVTGIIKVINNYMDVGGGKSKNKNQGLYYLYLEAVSVKNS 1
           TEDLVD CIPGDVVTVTGII+ INNY+D+GGGKSK KNQG YYLYLE +S+KNS
Sbjct: 250 TEDLVDACIPGDVVTVTGIIRTINNYVDIGGGKSKGKNQGFYYLYLEVISIKNS 303


>ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|222833525|gb|EEE72002.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  201 bits (511), Expect = 5e-50
 Identities = 95/114 (83%), Positives = 102/114 (89%)
 Frame = -1

Query: 342 PDGKFSPPTTCIIQGCKSRTFCPIRNSARPIDFQKIRIQELLRSENHEEGRVPRTVECEL 163
           PDGKFSPPT C + GCKSRTF PIR+SAR IDFQKIR+QELLRSE+HEEGRVPRTVECEL
Sbjct: 183 PDGKFSPPTVCSLNGCKSRTFNPIRSSARAIDFQKIRLQELLRSEDHEEGRVPRTVECEL 242

Query: 162 TEDLVDVCIPGDVVTVTGIIKVINNYMDVGGGKSKNKNQGLYYLYLEAVSVKNS 1
           TEDLVD CIPGDVVTVTGIIK  N+ +D GGGKSKNKNQG YYLYLE VS+KNS
Sbjct: 243 TEDLVDACIPGDVVTVTGIIKTFNSNLDTGGGKSKNKNQGFYYLYLEVVSIKNS 296


>ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 786

 Score =  197 bits (501), Expect = 8e-49
 Identities = 91/114 (79%), Positives = 104/114 (91%)
 Frame = -1

Query: 342 PDGKFSPPTTCIIQGCKSRTFCPIRNSARPIDFQKIRIQELLRSENHEEGRVPRTVECEL 163
           PDGKFSPP+ C + GCKS+TF PIR++A  IDFQKIR+QEL + ++HEEGRVPRTVECEL
Sbjct: 170 PDGKFSPPSFCELDGCKSKTFNPIRSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECEL 229

Query: 162 TEDLVDVCIPGDVVTVTGIIKVINNYMDVGGGKSKNKNQGLYYLYLEAVSVKNS 1
           TEDLVD CIPGDVVTVTGII+VINNYMD+GGGKSK+KNQG YYLYLEAVS+KNS
Sbjct: 230 TEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIKNS 283


>ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 793

 Score =  197 bits (501), Expect = 8e-49
 Identities = 91/114 (79%), Positives = 104/114 (91%)
 Frame = -1

Query: 342 PDGKFSPPTTCIIQGCKSRTFCPIRNSARPIDFQKIRIQELLRSENHEEGRVPRTVECEL 163
           PDGKFSPP+ C + GCKS+TF PIR++A  IDFQKIR+QEL + ++HEEGRVPRTVECEL
Sbjct: 177 PDGKFSPPSFCELDGCKSKTFNPIRSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECEL 236

Query: 162 TEDLVDVCIPGDVVTVTGIIKVINNYMDVGGGKSKNKNQGLYYLYLEAVSVKNS 1
           TEDLVD CIPGDVVTVTGII+VINNYMD+GGGKSK+KNQG YYLYLEAVS+KNS
Sbjct: 237 TEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIKNS 290


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