BLASTX nr result

ID: Coptis23_contig00035040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035040
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycin...   140   1e-31
gb|AFK40972.1| unknown [Medicago truncatula]                          139   4e-31
ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatul...   139   4e-31
ref|XP_002522818.1| transcription factor, putative [Ricinus comm...   139   4e-31
ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...   139   4e-31

>ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycine max]
           gi|255636705|gb|ACU18688.1| unknown [Glycine max]
          Length = 441

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = +3

Query: 270 IQVEMPTVWMSLKKSLHCRSELSDVHD-SSRNNLSTILTMKTGRSGCSRSISNLRDVIHG 446
           ++  MPTVW SLKKSLHC+SE SDVHD  +R  LSTILT + GRSGCSRSI+NL+DVIHG
Sbjct: 13  VKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKQLSTILTKRAGRSGCSRSIANLKDVIHG 72

Query: 447 SKRHLDKAPICSPRSIGSSELINPIAHEAVL 539
           SKRHLDK P CSPRSIGSSE +NPI HE +L
Sbjct: 73  SKRHLDKPPSCSPRSIGSSEFLNPITHEVIL 103


>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score =  139 bits (349), Expect = 4e-31
 Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
 Frame = +3

Query: 255 WKERTIQVEMPTVWMSLKKSLHCRSELSDVHD-SSRNNLSTILTMKTG--RSGCSRSISN 425
           +KE+T +  MPTVW SLKKSLHC+SE SDVHD  +R +LSTILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 426 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEAVL 539
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HE +L
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVIL 99


>ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|355508764|gb|AES89906.1| C2H2 zinc finger protein
           [Medicago truncatula]
          Length = 231

 Score =  139 bits (349), Expect = 4e-31
 Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
 Frame = +3

Query: 255 WKERTIQVEMPTVWMSLKKSLHCRSELSDVHD-SSRNNLSTILTMKTG--RSGCSRSISN 425
           +KE+T +  MPTVW SLKKSLHC+SE SDVHD  +R +LSTILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 426 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEAVL 539
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HE +L
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVIL 99


>ref|XP_002522818.1| transcription factor, putative [Ricinus communis]
           gi|223537902|gb|EEF39516.1| transcription factor,
           putative [Ricinus communis]
          Length = 385

 Score =  139 bits (349), Expect = 4e-31
 Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
 Frame = +3

Query: 282 MPTVWMSLKKSLHCRSELSDVHD-SSRNNLSTILTMKTGRSGCSRSISNLRDVIHGSKRH 458
           MPTVW SLKKSLHC+SE SDVHD  SR  LSTILT K GRSGCSRSI+NL+DVIHGSKRH
Sbjct: 1   MPTVWFSLKKSLHCKSEPSDVHDPKSRKQLSTILTRKAGRSGCSRSIANLKDVIHGSKRH 60

Query: 459 LDKAPICSPRSIGSSELINPIAHEAVL 539
            +K P CSPRSIGSSE +NPI HE +L
Sbjct: 61  TEKPPSCSPRSIGSSEFLNPITHEVIL 87


>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|358345288|ref|XP_003636713.1| C2H2 zinc finger
           protein [Medicago truncatula]
           gi|355502648|gb|AES83851.1| C2H2 zinc finger protein
           [Medicago truncatula] gi|355508763|gb|AES89905.1| C2H2
           zinc finger protein [Medicago truncatula]
          Length = 437

 Score =  139 bits (349), Expect = 4e-31
 Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
 Frame = +3

Query: 255 WKERTIQVEMPTVWMSLKKSLHCRSELSDVHD-SSRNNLSTILTMKTG--RSGCSRSISN 425
           +KE+T +  MPTVW SLKKSLHC+SE SDVHD  +R +LSTILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 426 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEAVL 539
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HE +L
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVIL 99


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