BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035008
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   216   2e-54
gb|ACQ84165.1| truncated structural maintenance of chromosomes f...   216   2e-54
ref|XP_002871281.1| structural maintenance of chromosomes family...   214   4e-54
emb|CBI38567.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   214   8e-54

>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/134 (76%), Positives = 116/134 (86%)
 Frame = +1

Query: 1   FGCRARGTQRASTLKDFIKTGCSHAVVHVEVKNQGEDAFKPEIYGDLXXXXXXXXXXXXX 180
           FGCRARGTQRA+TLKDFIKTGCS+A+V+VE+KNQGEDAFKPEIYGD              
Sbjct: 67  FGCRARGTQRAATLKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSL 126

Query: 181 XVLKDHQGKKVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKEKFKFFFKA 360
            VLKDHQG+K++SRKE+L ELVEH+NIDVENPCVIMSQDKSREFLHSGNDK+KFKFF+KA
Sbjct: 127 TVLKDHQGRKISSRKEELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKA 186

Query: 361 TLLQQVSDLLQDIG 402
           TLLQQV D+LQ IG
Sbjct: 187 TLLQQVDDILQSIG 200


>gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A
           [Arabidopsis thaliana]
          Length = 876

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/134 (76%), Positives = 116/134 (86%)
 Frame = +1

Query: 1   FGCRARGTQRASTLKDFIKTGCSHAVVHVEVKNQGEDAFKPEIYGDLXXXXXXXXXXXXX 180
           FGCRARGTQRA+TLKDFIKTGCS+A+V+VE+KNQGEDAFKPEIYGD              
Sbjct: 67  FGCRARGTQRAATLKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSL 126

Query: 181 XVLKDHQGKKVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKEKFKFFFKA 360
            VLKDHQG+K++SRKE+L ELVEH+NIDVENPCVIMSQDKSREFLHSGNDK+KFKFF+KA
Sbjct: 127 TVLKDHQGRKISSRKEELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKA 186

Query: 361 TLLQQVSDLLQDIG 402
           TLLQQV D+LQ IG
Sbjct: 187 TLLQQVDDILQSIG 200


>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
           structural maintenance of chromosomes family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1063

 Score =  214 bits (546), Expect = 4e-54
 Identities = 102/134 (76%), Positives = 115/134 (85%)
 Frame = +1

Query: 1   FGCRARGTQRASTLKDFIKTGCSHAVVHVEVKNQGEDAFKPEIYGDLXXXXXXXXXXXXX 180
           FGCRARGTQRA+TLKDFIK GCS+A+VHVE+KNQGEDAFKPEIYGD              
Sbjct: 66  FGCRARGTQRAATLKDFIKNGCSYALVHVELKNQGEDAFKPEIYGDTLIIERRISDSTSL 125

Query: 181 XVLKDHQGKKVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKEKFKFFFKA 360
            VLKDHQG+K++SR+E+L +LVEH+NIDVENPCVIMSQDKSREFLHSGNDK+KFKFF+KA
Sbjct: 126 TVLKDHQGRKISSRREELRQLVEHYNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKA 185

Query: 361 TLLQQVSDLLQDIG 402
           TLLQQV DLLQ IG
Sbjct: 186 TLLQQVDDLLQSIG 199


>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  214 bits (544), Expect = 8e-54
 Identities = 104/134 (77%), Positives = 116/134 (86%)
 Frame = +1

Query: 1   FGCRARGTQRASTLKDFIKTGCSHAVVHVEVKNQGEDAFKPEIYGDLXXXXXXXXXXXXX 180
           FG RA+ TQRA+TLK+FIKTGCS+AV+ VE+KN+GEDAFKPEIYGD+             
Sbjct: 36  FGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRISVSTSS 95

Query: 181 XVLKDHQGKKVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKEKFKFFFKA 360
            VLKDHQGK+VASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDK+KFKFFFKA
Sbjct: 96  TVLKDHQGKRVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKA 155

Query: 361 TLLQQVSDLLQDIG 402
           TLLQQV+DLL +IG
Sbjct: 156 TLLQQVNDLLVNIG 169


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  214 bits (544), Expect = 8e-54
 Identities = 104/134 (77%), Positives = 116/134 (86%)
 Frame = +1

Query: 1   FGCRARGTQRASTLKDFIKTGCSHAVVHVEVKNQGEDAFKPEIYGDLXXXXXXXXXXXXX 180
           FG RA+ TQRA+TLK+FIKTGCS+AV+ VE+KN+GEDAFKPEIYGD+             
Sbjct: 66  FGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRISVSTSS 125

Query: 181 XVLKDHQGKKVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKEKFKFFFKA 360
            VLKDHQGK+VASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDK+KFKFFFKA
Sbjct: 126 TVLKDHQGKRVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKA 185

Query: 361 TLLQQVSDLLQDIG 402
           TLLQQV+DLL +IG
Sbjct: 186 TLLQQVNDLLVNIG 199