BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034999
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   356   3e-96
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              356   3e-96
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...   345   6e-93
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   342   4e-92
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   337   9e-91

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  356 bits (913), Expect = 3e-96
 Identities = 177/220 (80%), Positives = 198/220 (90%)
 Frame = +2

Query: 2   MNPVQISRGIGKTAEALVSELKTMSRVVEDHELADVAAVSAGNDYVVGNMIADALCQVGR 181
           MNP+QISRGI KTA ALVSELK MSR VEDHELA VAAVSAGNDY VGNMI+DA+ QVGR
Sbjct: 138 MNPIQISRGIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVGR 197

Query: 182 EGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFVTDRKKMLVEYHSCKILLVDKKVIHPK 361
            GV+TIEKGK  ENS+Q+VEGMQFDRGYLS YFVTDR+KM+VE+H CK+LLVDKK+ +PK
Sbjct: 198 RGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPK 257

Query: 362 DFFRILDNAVKEKYPVVIIAEDIEKDALTPLIRNKLRGALKAVAIKAPAFGERKSHYLDD 541
           + F+ILDNAVKEKYP+VI+AE IE++AL P+IRNKLRG LKA AIKAPAFGERKSHYLDD
Sbjct: 258 EMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDD 317

Query: 542 IAILTGATVVRDEMGLNLEKVGKEVLGTATKVVITKDSTL 661
           +AILTG TV+ DEMGL LEK GKEVLGTATKVVITKDSTL
Sbjct: 318 LAILTGGTVISDEMGLTLEKAGKEVLGTATKVVITKDSTL 357


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  356 bits (913), Expect = 3e-96
 Identities = 177/220 (80%), Positives = 198/220 (90%)
 Frame = +2

Query: 2   MNPVQISRGIGKTAEALVSELKTMSRVVEDHELADVAAVSAGNDYVVGNMIADALCQVGR 181
           MNP+QISRGI KTA ALVSELK MSR VEDHELA VAAVSAGNDY VGNMI+DA+ QVGR
Sbjct: 112 MNPIQISRGIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVGR 171

Query: 182 EGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFVTDRKKMLVEYHSCKILLVDKKVIHPK 361
            GV+TIEKGK  ENS+Q+VEGMQFDRGYLS YFVTDR+KM+VE+H CK+LLVDKK+ +PK
Sbjct: 172 RGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPK 231

Query: 362 DFFRILDNAVKEKYPVVIIAEDIEKDALTPLIRNKLRGALKAVAIKAPAFGERKSHYLDD 541
           + F+ILDNAVKEKYP+VI+AE IE++AL P+IRNKLRG LKA AIKAPAFGERKSHYLDD
Sbjct: 232 EMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDD 291

Query: 542 IAILTGATVVRDEMGLNLEKVGKEVLGTATKVVITKDSTL 661
           +AILTG TV+ DEMGL LEK GKEVLGTATKVVITKDSTL
Sbjct: 292 LAILTGGTVISDEMGLTLEKAGKEVLGTATKVVITKDSTL 331


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  345 bits (884), Expect = 6e-93
 Identities = 171/220 (77%), Positives = 199/220 (90%)
 Frame = +2

Query: 2   MNPVQISRGIGKTAEALVSELKTMSRVVEDHELADVAAVSAGNDYVVGNMIADALCQVGR 181
           MNPVQI+RGI KT+EALVSELK MSR VE+ ELADVAAVSAGNDY VGNMI+DAL QVGR
Sbjct: 90  MNPVQIARGIVKTSEALVSELKLMSREVENDELADVAAVSAGNDYTVGNMISDALQQVGR 149

Query: 182 EGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFVTDRKKMLVEYHSCKILLVDKKVIHPK 361
            GVVTIEKG+ TEN +++VEGMQFDRGYLS YFVTDR++M+VE+H+CK+LLVDKK+ + K
Sbjct: 150 RGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDRQRMVVEFHNCKLLLVDKKIQNAK 209

Query: 362 DFFRILDNAVKEKYPVVIIAEDIEKDALTPLIRNKLRGALKAVAIKAPAFGERKSHYLDD 541
           + F+ILDNAVKE YP+VI+AED++++AL P+IRNKL+G LK  AIKAPAFGERKSHYLDD
Sbjct: 210 EVFKILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLKGLLKGAAIKAPAFGERKSHYLDD 269

Query: 542 IAILTGATVVRDEMGLNLEKVGKEVLGTATKVVITKDSTL 661
           IAILTG TV+RD+MGL LEK GKEVLGTATKVVITKDSTL
Sbjct: 270 IAILTGGTVIRDDMGLKLEKAGKEVLGTATKVVITKDSTL 309


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  342 bits (877), Expect = 4e-92
 Identities = 168/220 (76%), Positives = 200/220 (90%)
 Frame = +2

Query: 2   MNPVQISRGIGKTAEALVSELKTMSRVVEDHELADVAAVSAGNDYVVGNMIADALCQVGR 181
           MNPVQ++RGI +T++ALVSELK MSR VED E+A VAAVSAGNDY VG MI+DAL +VG+
Sbjct: 147 MNPVQVARGIERTSKALVSELKLMSREVEDDEIAAVAAVSAGNDYAVGKMISDALREVGK 206

Query: 182 EGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFVTDRKKMLVEYHSCKILLVDKKVIHPK 361
            GVVTI+KG+  +N++Q+V+GMQFDRGYLS YFVTDR+KM VE+H+CK+LLVDKK+ +PK
Sbjct: 207 RGVVTIDKGEYIDNNLQIVKGMQFDRGYLSPYFVTDRRKMTVEFHNCKLLLVDKKITNPK 266

Query: 362 DFFRILDNAVKEKYPVVIIAEDIEKDALTPLIRNKLRGALKAVAIKAPAFGERKSHYLDD 541
           + F+ILDNAVKEKYP+V++AE IE++AL P+IRNKLRGALKA AIKAPAFGERK HYLDD
Sbjct: 267 EMFKILDNAVKEKYPIVVVAEGIEQEALAPVIRNKLRGALKAAAIKAPAFGERKGHYLDD 326

Query: 542 IAILTGATVVRDEMGLNLEKVGKEVLGTATKVVITKDSTL 661
           IAILTGATV+RDEMGL LEKVGKEVLG+ATKVVITKDSTL
Sbjct: 327 IAILTGATVIRDEMGLTLEKVGKEVLGSATKVVITKDSTL 366


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  337 bits (865), Expect = 9e-91
 Identities = 169/220 (76%), Positives = 195/220 (88%)
 Frame = +2

Query: 2   MNPVQISRGIGKTAEALVSELKTMSRVVEDHELADVAAVSAGNDYVVGNMIADALCQVGR 181
           MNPVQI+RGI KTA+ALVSELK MSR VEDHE+A VAAVSAGNDY VG++++DA  QVG 
Sbjct: 159 MNPVQIARGIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVGW 218

Query: 182 EGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFVTDRKKMLVEYHSCKILLVDKKVIHPK 361
           +GVV IEKGKS +NS+Q+VEGMQFDRGYLS YFVTDR+KM+VE+H CK+LLVDKK+  PK
Sbjct: 219 KGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPK 278

Query: 362 DFFRILDNAVKEKYPVVIIAEDIEKDALTPLIRNKLRGALKAVAIKAPAFGERKSHYLDD 541
           + F+ILDNAVKEKYP+VI+AE IE +AL P+IRNKLRG LKA AIKAPAFGERKSHYLDD
Sbjct: 279 EMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDD 338

Query: 542 IAILTGATVVRDEMGLNLEKVGKEVLGTATKVVITKDSTL 661
           IA LTGATVVR++ GL LEK GKEVLG+A KVVI+KDSTL
Sbjct: 339 IATLTGATVVREDNGLTLEKTGKEVLGSACKVVISKDSTL 378