BLASTX nr result

ID: Coptis23_contig00034985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034985
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78566.1| cellulose synthase [Populus tomentosa]                 172   3e-41
gb|AEE60894.1| cellulose synthase [Populus tomentosa]                 172   3e-41
gb|AAT09897.1| cellulose synthase [Populus tremula x Populus tre...   172   3e-41
ref|XP_002305060.1| cellulose synthase [Populus trichocarpa] gi|...   170   1e-40
gb|AEN70835.1| cellulose synthase [Gossypium armourianum] gi|345...   169   2e-40

>gb|AFZ78566.1| cellulose synthase [Populus tomentosa]
          Length = 978

 Score =  172 bits (435), Expect = 3e-41
 Identities = 86/154 (55%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 MEDVDM-EAGNRTTMASHLHDSQDVGIHSRHLSNFSAADSESYAESGNPIWKNRVESWXX 284
           ++DV+  E+GN++TMASHL+DSQDVGIH+RH+S+ S  DSE   E GNPIWKNRVESW  
Sbjct: 63  LDDVEKKESGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDEYGNPIWKNRVESWKD 122

Query: 283 XXXXXXXXXXXKGGXXXXXXXXXXXXXXXXXEGVQPLSTIVPVPSNKITPYRIVIITRLI 104
                                          E  +PLS + P+P NK+TPYR VII RL+
Sbjct: 123 KKNKKKKRSPKAETEPAQVPTEQQMEEKPSAEASEPLSIVYPIPRNKLTPYRAVIIMRLV 182

Query: 103 ILGLFFHYRITNPVESAYGLWLTSIICEIWFAVS 2
           ILGLFFHYRITNPV+SA+GLWLTS+ICEIWFA S
Sbjct: 183 ILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFS 216


>gb|AEE60894.1| cellulose synthase [Populus tomentosa]
          Length = 978

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/154 (55%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 MEDVDM-EAGNRTTMASHLHDSQDVGIHSRHLSNFSAADSESYAESGNPIWKNRVESWXX 284
           ++DV+  E+GN++TMASHL+DSQDVGIH+RH+S+ S  DSE   E GNPIWKNRVESW  
Sbjct: 63  LDDVEKKESGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDEYGNPIWKNRVESWKD 122

Query: 283 XXXXXXXXXXXKGGXXXXXXXXXXXXXXXXXEGVQPLSTIVPVPSNKITPYRIVIITRLI 104
                                          +  +PLS + P+P NK+TPYR VII RL+
Sbjct: 123 KKNKKKKKSPKAETEPAQVPTEQQMEEKPSGDASEPLSIVYPIPRNKLTPYRAVIIMRLV 182

Query: 103 ILGLFFHYRITNPVESAYGLWLTSIICEIWFAVS 2
           ILGLFFHYRITNPV+SA+GLWLTS+ICEIWFA S
Sbjct: 183 ILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFS 216


>gb|AAT09897.1| cellulose synthase [Populus tremula x Populus tremuloides]
          Length = 978

 Score =  172 bits (435), Expect = 3e-41
 Identities = 86/154 (55%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 MEDVDM-EAGNRTTMASHLHDSQDVGIHSRHLSNFSAADSESYAESGNPIWKNRVESWXX 284
           ++DV+  E+GN++TMASHL+DSQDVGIH+RH+S+ S  DSE   E GNPIWKNRVESW  
Sbjct: 63  LDDVEKKESGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDEYGNPIWKNRVESWKD 122

Query: 283 XXXXXXXXXXXKGGXXXXXXXXXXXXXXXXXEGVQPLSTIVPVPSNKITPYRIVIITRLI 104
                                          E  +PLS + P+P NK+TPYR VII RL+
Sbjct: 123 KKNKKKKRSPKAETEPAQVPTEQQMEEKPSAEASEPLSIVYPIPRNKLTPYRAVIIMRLV 182

Query: 103 ILGLFFHYRITNPVESAYGLWLTSIICEIWFAVS 2
           ILGLFFHYRITNPV+SA+GLWLTS+ICEIWFA S
Sbjct: 183 ILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFS 216


>ref|XP_002305060.1| cellulose synthase [Populus trichocarpa]
           gi|222848024|gb|EEE85571.1| cellulose synthase [Populus
           trichocarpa]
          Length = 1014

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/154 (54%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 MEDVDME-AGNRTTMASHLHDSQDVGIHSRHLSNFSAADSESYAESGNPIWKNRVESWXX 284
           ++DV+ + +GN++TMASHL+DSQDVGIH+RH+S+ S  DSE   E GNPIWKNRVESW  
Sbjct: 99  LDDVEKKGSGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDEYGNPIWKNRVESWKD 158

Query: 283 XXXXXXXXXXXKGGXXXXXXXXXXXXXXXXXEGVQPLSTIVPVPSNKITPYRIVIITRLI 104
                                             +PLS + P+P NK+TPYR VII RL+
Sbjct: 159 KKNKKKKSSPKTETEPAQVPPEQQMEDKPSAAASEPLSIVYPIPRNKLTPYRAVIIMRLV 218

Query: 103 ILGLFFHYRITNPVESAYGLWLTSIICEIWFAVS 2
           ILGLFFHYRITNPV+SA+GLWLTS+ICEIWFA S
Sbjct: 219 ILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFS 252


>gb|AEN70835.1| cellulose synthase [Gossypium armourianum]
           gi|345104029|gb|AEN70836.1| cellulose synthase
           [Gossypium harknessii]
          Length = 974

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/153 (53%), Positives = 103/153 (67%)
 Frame = -1

Query: 460 MEDVDMEAGNRTTMASHLHDSQDVGIHSRHLSNFSAADSESYAESGNPIWKNRVESWXXX 281
           ++DV+   GN++TMA+HL  SQDVGIH+RH+S+ S  DSE   ++GNPIWKNRVESW   
Sbjct: 63  LDDVEKATGNQSTMAAHLSKSQDVGIHARHISSVSTLDSEMTEDNGNPIWKNRVESWKEK 122

Query: 280 XXXXXXXXXXKGGXXXXXXXXXXXXXXXXXEGVQPLSTIVPVPSNKITPYRIVIITRLII 101
                     K                   +  QPLSTI+P+P +++ PYR VII RLII
Sbjct: 123 KNKKKKPATTKVEREAEIPPEQQMEDKPAPDASQPLSTIIPIPKSRLAPYRTVIIMRLII 182

Query: 100 LGLFFHYRITNPVESAYGLWLTSIICEIWFAVS 2
           LGLFFHYR+TNPV+SA+GLWLTS+ICEIWFA S
Sbjct: 183 LGLFFHYRVTNPVDSAFGLWLTSVICEIWFAFS 215


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