BLASTX nr result

ID: Coptis23_contig00034970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034970
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31603.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002277563.1| PREDICTED: cucumisin-like [Vitis vinifera]         84   1e-14
ref|XP_002277495.2| PREDICTED: uncharacterized protein LOC100259...    78   7e-13
emb|CBI31602.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_004165286.1| PREDICTED: LOW QUALITY PROTEIN: cucumisin-li...    76   2e-12

>emb|CBI31603.3| unnamed protein product [Vitis vinifera]
          Length = 999

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/135 (39%), Positives = 73/135 (54%)
 Frame = -3

Query: 407 YCEPDEMDQNLTKGNIVLCNPIDLGIDGSGPLVYGAYGTIMIATVGEWDVPYPYPLPASA 228
           +C  + +D NL KG IVLC   D+  +G+G  + GA GT+M A  G  D  +P+PLPAS 
Sbjct: 344 FCTRNSLDPNLVKGKIVLC---DIFSNGTGAFLAGAVGTVM-ADRGAKDSAWPFPLPASY 399

Query: 227 VTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFTNR 48
           +   DG  IA Y++ST N TA + K                 S  V D  AP + SF++R
Sbjct: 400 LGAQDGSSIAYYVTSTSNPTASILK-----------------STEVNDTLAPFIVSFSSR 442

Query: 47  GPAILTSAVLKPDIS 3
           GP   T  +LKPD++
Sbjct: 443 GPNPATLDILKPDLA 457


>ref|XP_002277563.1| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 742

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/135 (39%), Positives = 73/135 (54%)
 Frame = -3

Query: 407 YCEPDEMDQNLTKGNIVLCNPIDLGIDGSGPLVYGAYGTIMIATVGEWDVPYPYPLPASA 228
           +C  + +D NL KG IVLC   D+  +G+G  + GA GT+M A  G  D  +P+PLPAS 
Sbjct: 385 FCTRNSLDPNLVKGKIVLC---DIFSNGTGAFLAGAVGTVM-ADRGAKDSAWPFPLPASY 440

Query: 227 VTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFTNR 48
           +   DG  IA Y++ST N TA + K                 S  V D  AP + SF++R
Sbjct: 441 LGAQDGSSIAYYVTSTSNPTASILK-----------------STEVNDTLAPFIVSFSSR 483

Query: 47  GPAILTSAVLKPDIS 3
           GP   T  +LKPD++
Sbjct: 484 GPNPATLDILKPDLA 498


>ref|XP_002277495.2| PREDICTED: uncharacterized protein LOC100259879 [Vitis vinifera]
          Length = 1429

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/135 (37%), Positives = 73/135 (54%)
 Frame = -3

Query: 407 YCEPDEMDQNLTKGNIVLCNPIDLGIDGSGPLVYGAYGTIMIATVGEWDVPYPYPLPASA 228
           +C P  ++ NL KG IVLC   D+  +G+G  + GA G +M  T+ + D    +PLPAS 
Sbjct: 393 FCFPSTLNPNLVKGKIVLC---DVKTNGAGAFLAGAVGALMADTLPK-DSSRSFPLPASH 448

Query: 227 VTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFTNR 48
           ++  DG  IA+YI+ST N TA                  I +S  V D  AP + SF++R
Sbjct: 449 LSARDGSSIANYINSTSNPTAS-----------------IFKSTEVSDALAPYVVSFSSR 491

Query: 47  GPAILTSAVLKPDIS 3
           GP   +  +LKPDI+
Sbjct: 492 GPNPASFDLLKPDIA 506



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -3

Query: 407  YCEPDEMDQNLTKGNIVLCNPIDLGIDG-SGPLVYGAYGTIMIATVG-EWDVPYPYPLPA 234
            +CE + ++ NL KG IVLC  +  G++  S   + GA GT+++  +    D  Y YPLPA
Sbjct: 1068 FCEKNSLNPNLVKGKIVLCIGLGAGLEETSNAFLAGAVGTVIVDGLRFPKDSSYIYPLPA 1127

Query: 233  SAVTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFT 54
            S +   DG+ IA YISST N TA + K                 S  V D  AP + SF+
Sbjct: 1128 SRLGAGDGKRIAYYISSTSNPTASILK-----------------SIEVKDTLAPYVPSFS 1170

Query: 53   NRGPAILTSAVLKPDIS 3
            +RGP  +T  +LKPD++
Sbjct: 1171 SRGPNNITHDLLKPDLT 1187


>emb|CBI31602.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/135 (37%), Positives = 73/135 (54%)
 Frame = -3

Query: 407 YCEPDEMDQNLTKGNIVLCNPIDLGIDGSGPLVYGAYGTIMIATVGEWDVPYPYPLPASA 228
           +C P  ++ NL KG IVLC   D+  +G+G  + GA G +M  T+ + D    +PLPAS 
Sbjct: 391 FCFPSTLNPNLVKGKIVLC---DVKTNGAGAFLAGAVGALMADTLPK-DSSRSFPLPASH 446

Query: 227 VTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFTNR 48
           ++  DG  IA+YI+ST N TA                  I +S  V D  AP + SF++R
Sbjct: 447 LSARDGSSIANYINSTSNPTAS-----------------IFKSTEVSDALAPYVVSFSSR 489

Query: 47  GPAILTSAVLKPDIS 3
           GP   +  +LKPDI+
Sbjct: 490 GPNPASFDLLKPDIA 504



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -3

Query: 407  YCEPDEMDQNLTKGNIVLCNPIDLGIDG-SGPLVYGAYGTIMIATVG-EWDVPYPYPLPA 234
            +CE + ++ NL KG IVLC  +  G++  S   + GA GT+++  +    D  Y YPLPA
Sbjct: 1113 FCEKNSLNPNLVKGKIVLCIGLGAGLEETSNAFLAGAVGTVIVDGLRFPKDSSYIYPLPA 1172

Query: 233  SAVTNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFT 54
            S +   DG+ IA YISST N TA + K                 S  V D  AP + SF+
Sbjct: 1173 SRLGAGDGKRIAYYISSTSNPTASILK-----------------SIEVKDTLAPYVPSFS 1215

Query: 53   NRGPAILTSAVLKPDIS 3
            +RGP  +T  +LKPD++
Sbjct: 1216 SRGPNNITHDLLKPDLT 1232


>ref|XP_004165286.1| PREDICTED: LOW QUALITY PROTEIN: cucumisin-like, partial [Cucumis
           sativus]
          Length = 718

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 49/134 (36%), Positives = 69/134 (51%)
 Frame = -3

Query: 404 CEPDEMDQNLTKGNIVLCNPIDLGIDGSGPLVYGAYGTIMIATVGEWDVPYPYPLPASAV 225
           C P  +D N  +G IVLC   DL  DG   L+ GA GTIM  +    +V + +PLP S +
Sbjct: 356 CFPGSLDMNKVQGKIVLC---DLISDGEAALISGAVGTIMQGSTLP-EVAFLFPLPVSLI 411

Query: 224 TNSDGEYIASYISSTRNATAIL*KVKLFNSFCRNATAIIHESEVVYDPSAPSLTSFTNRG 45
             + G+ I  Y+ S  N  AI                 I +S  + D SAPS+ SF++RG
Sbjct: 412 NFNAGKNIFQYLRSNSNPEAI-----------------IEKSTTIEDLSAPSVISFSSRG 454

Query: 44  PAILTSAVLKPDIS 3
           P  +T  +LKPD++
Sbjct: 455 PNTVTLDILKPDLA 468


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