BLASTX nr result
ID: Coptis23_contig00034965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00034965
(899 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002465884.1| hypothetical protein SORBIDRAFT_01g047560 [S... 111 2e-26
gb|AFW89634.1| glutamyl-tRNA synthetase, cytoplasmic [Zea mays] 110 3e-26
ref|NP_001147450.1| glutamyl-tRNA synthetase, cytoplasmic [Zea m... 110 3e-26
tpg|DAA43300.1| TPA: hypothetical protein ZEAMMB73_728465 [Zea m... 110 4e-26
dbj|BAJ95658.1| predicted protein [Hordeum vulgare subsp. vulgare] 108 4e-26
>ref|XP_002465884.1| hypothetical protein SORBIDRAFT_01g047560 [Sorghum bicolor]
gi|241919738|gb|EER92882.1| hypothetical protein
SORBIDRAFT_01g047560 [Sorghum bicolor]
Length = 712
Score = 111 bits (278), Expect(2) = 2e-26
Identities = 67/141 (47%), Positives = 86/141 (60%), Gaps = 9/141 (6%)
Frame = -3
Query: 492 QMA*VLILKGKVYVDNTPREEMRKGWMALN*NVGINAS*CRKLI----LNIWKYGKKWSQ 325
+MA LI +GK YVD+TP+EEMRK M GI + CR L++WK ++
Sbjct: 285 EMAESLIKQGKAYVDDTPKEEMRKERMD-----GIESR-CRNNTVEENLSLWKEMVNGTE 338
Query: 324 -----ALRVVITLPSWYAGHMEL*DPVYYCCNLVHHHRTEAKYKLYPTYDFACPFVDATE 160
+R + + + L DPVYY CN HHR +KYK+YPTYDFACPFVDA E
Sbjct: 339 RGMQCCVRGKLDMQD---PNKSLRDPVYYRCNTDPHHRVGSKYKVYPTYDFACPFVDALE 395
Query: 159 GSTHSLRSRDFYDWNAQYYRI 97
G TH+LRS +++D NAQYYRI
Sbjct: 396 GVTHALRSSEYHDRNAQYYRI 416
Score = 34.7 bits (78), Expect(2) = 2e-26
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2
Query: 97 LEDMGLRKI*ISEFRSLNMPYTVLS 23
L+DMGLR++ I EF LNM YT+LS
Sbjct: 417 LQDMGLRRVEIYEFSRLNMVYTLLS 441
>gb|AFW89634.1| glutamyl-tRNA synthetase, cytoplasmic [Zea mays]
Length = 715
Score = 110 bits (275), Expect(2) = 3e-26
Identities = 64/138 (46%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
Frame = -3
Query: 492 QMA*VLILKGKVYVDNTPREEMRKGWM------ALN*NVGINAS*CRKLILNIWKYGKKW 331
+MA LI +GK Y+D+TP+E+MRK M N V N S +++ N + G +
Sbjct: 288 EMAGSLIKQGKAYIDDTPKEQMRKERMDGIESRCRNSTVEENLSLWNEMV-NGTERGMQC 346
Query: 330 SQALRVVITLPSWYAGHMEL*DPVYYCCNLVHHHRTEAKYKLYPTYDFACPFVDATEGST 151
++ + P + L DPVYY CN+ HHR +KYK+YPTYDFACPFVDA EG T
Sbjct: 347 CVRGKLDMQDP-----NKSLRDPVYYRCNIDPHHRVGSKYKVYPTYDFACPFVDALEGVT 401
Query: 150 HSLRSRDFYDWNAQYYRI 97
H+LRS +++D NAQYYRI
Sbjct: 402 HALRSSEYHDRNAQYYRI 419
Score = 34.7 bits (78), Expect(2) = 3e-26
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2
Query: 97 LEDMGLRKI*ISEFRSLNMPYTVLS 23
L+DMGLR++ I EF LNM YT+LS
Sbjct: 420 LQDMGLRRVEIYEFSRLNMVYTLLS 444
>ref|NP_001147450.1| glutamyl-tRNA synthetase, cytoplasmic [Zea mays]
gi|195611488|gb|ACG27574.1| glutamyl-tRNA synthetase,
cytoplasmic [Zea mays]
Length = 715
Score = 110 bits (275), Expect(2) = 3e-26
Identities = 64/138 (46%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
Frame = -3
Query: 492 QMA*VLILKGKVYVDNTPREEMRKGWM------ALN*NVGINAS*CRKLILNIWKYGKKW 331
+MA LI +GK Y+D+TP+E+MRK M N V N S +++ N + G +
Sbjct: 288 EMAGSLIKQGKAYIDDTPKEQMRKERMDGIESRCRNSTVEENLSLWNEMV-NGTERGMQC 346
Query: 330 SQALRVVITLPSWYAGHMEL*DPVYYCCNLVHHHRTEAKYKLYPTYDFACPFVDATEGST 151
++ + P + L DPVYY CN+ HHR +KYK+YPTYDFACPFVDA EG T
Sbjct: 347 CVRGKLDMQDP-----NKSLRDPVYYRCNIDPHHRVGSKYKVYPTYDFACPFVDALEGVT 401
Query: 150 HSLRSRDFYDWNAQYYRI 97
H+LRS +++D NAQYYRI
Sbjct: 402 HALRSSEYHDRNAQYYRI 419
Score = 34.7 bits (78), Expect(2) = 3e-26
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2
Query: 97 LEDMGLRKI*ISEFRSLNMPYTVLS 23
L+DMGLR++ I EF LNM YT+LS
Sbjct: 420 LQDMGLRRVEIYEFSRLNMVYTLLS 444
>tpg|DAA43300.1| TPA: hypothetical protein ZEAMMB73_728465 [Zea mays]
Length = 715
Score = 110 bits (274), Expect(2) = 4e-26
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 9/141 (6%)
Frame = -3
Query: 492 QMA*VLILKGKVYVDNTPREEMRKGWMALN*NVGINAS*CRKLI----LNIWKYGKKWSQ 325
+MA LI +GK Y+D+TP+E+MRK M GI + CR L++WK ++
Sbjct: 288 EMAESLIKQGKAYIDDTPKEQMRKERMD-----GIESR-CRNNTVEENLSLWKEMVNGTE 341
Query: 324 -----ALRVVITLPSWYAGHMEL*DPVYYCCNLVHHHRTEAKYKLYPTYDFACPFVDATE 160
+R + + + L DPVYY CN HHR +KYK+YPTYDFACPFVDA E
Sbjct: 342 RGMQCCVRGKLDMQD---PNKSLRDPVYYRCNTDPHHRVGSKYKVYPTYDFACPFVDALE 398
Query: 159 GSTHSLRSRDFYDWNAQYYRI 97
G TH+LRS +++D NAQYYRI
Sbjct: 399 GVTHALRSSEYHDRNAQYYRI 419
Score = 34.7 bits (78), Expect(2) = 4e-26
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -2
Query: 97 LEDMGLRKI*ISEFRSLNMPYTVLS 23
L+DMGLR++ I EF LNM YT+LS
Sbjct: 420 LQDMGLRRVEIYEFSRLNMVYTLLS 444
>dbj|BAJ95658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 108 bits (271), Expect(2) = 4e-26
Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Frame = -3
Query: 492 QMA*VLILKGKVYVDNTPREEMRKGWM------ALN*NVGINAS*CRKLILNIWKYGKKW 331
+MA LI +GK YVD+TP+E+MR M N V N S ++++ N K G +
Sbjct: 289 EMAESLIKQGKAYVDDTPKEQMRSERMDGVESKRRNSTVEENLSLWKEMV-NGTKRGTEC 347
Query: 330 SQALRVVITLPSWYAGHMEL*DPVYYCCNLVHHHRTEAKYKLYPTYDFACPFVDATEGST 151
++ + P+ L DPVYY CN HHR +KYK+YPTYDFACPFVDA EG T
Sbjct: 348 CVRGKLDMQDPN-----KSLRDPVYYRCNPDPHHRVGSKYKVYPTYDFACPFVDALEGVT 402
Query: 150 HSLRSRDFYDWNAQYYRI 97
H+LRS +++D NAQYYRI
Sbjct: 403 HALRSSEYHDRNAQYYRI 420
Score = 35.8 bits (81), Expect(2) = 4e-26
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2
Query: 97 LEDMGLRKI*ISEFRSLNMPYTVLS 23
L+DMGLR++ I EF LNM YTVLS
Sbjct: 421 LQDMGLRRVEIYEFSRLNMVYTVLS 445