BLASTX nr result

ID: Coptis23_contig00034962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034962
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330652.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing pro...   175   3e-42
emb|CAN72626.1| hypothetical protein VITISV_043347 [Vitis vinifera]   174   7e-42
ref|XP_002531896.1| conserved hypothetical protein [Ricinus comm...   173   1e-41
ref|XP_003528491.1| PREDICTED: C2 and GRAM domain-containing pro...   166   1e-39

>ref|XP_002330652.1| predicted protein [Populus trichocarpa] gi|222872256|gb|EEF09387.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/142 (63%), Positives = 102/142 (71%), Gaps = 5/142 (3%)
 Frame = -1

Query: 413 LNFLFPSWWEXXXXXXXXXXXXXXXXXFS-----SGDGNTSRCDNSVDICGDLLDDKEKM 249
           L+FL PSWWE                 FS      GDG        ++  GD +D+K+KM
Sbjct: 7   LDFLVPSWWEIKVTVAAAMFVILSFCFFSWSGGGGGDGGGGDRAVVLENSGDGIDEKDKM 66

Query: 248 GHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGSRNPMW 69
           G  KGDSQ+NS Y+IKLELLAAKNLIGANLNGTSDPYAIITCG +KRFSSMVPGSRNPMW
Sbjct: 67  GQLKGDSQANSAYIIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRNPMW 126

Query: 68  GEEFNFFVNELPVQVNMTIYDW 3
           GEEFNF V+ELPVQ+N+TIYDW
Sbjct: 127 GEEFNFSVDELPVQINVTIYDW 148


>ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
           [Vitis vinifera] gi|296084286|emb|CBI24674.3| unnamed
           protein product [Vitis vinifera]
          Length = 588

 Score =  175 bits (444), Expect = 3e-42
 Identities = 88/147 (59%), Positives = 104/147 (70%), Gaps = 3/147 (2%)
 Frame = -1

Query: 434 IKMTELILNFLFPSWWEXXXXXXXXXXXXXXXXXFSSGDGNTSRCDNSVDI---CGDLLD 264
           ++M E  L+FL P+WWE                 F+ G+G       + +     GDL+D
Sbjct: 1   MEMIEEALHFLVPTWWEVEISVVAAVFVIITYWFFTFGNGEIDESQATGEGLIGAGDLID 60

Query: 263 DKEKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGS 84
           D  KMG  KGD Q+NS YVIKLELLAAKNLIGANLNG SDPYAIITCGE+KRFSSMVPGS
Sbjct: 61  DNVKMGQLKGDPQTNSAYVIKLELLAAKNLIGANLNGMSDPYAIITCGEEKRFSSMVPGS 120

Query: 83  RNPMWGEEFNFFVNELPVQVNMTIYDW 3
           RNPMWGEEFNF V++LPV++N+TIYDW
Sbjct: 121 RNPMWGEEFNFSVDDLPVKINVTIYDW 147


>emb|CAN72626.1| hypothetical protein VITISV_043347 [Vitis vinifera]
          Length = 411

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/148 (59%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = -1

Query: 437 SIKMTELILNFLFPSWWEXXXXXXXXXXXXXXXXXFSSGDGNTSRCDNSVDI---CGDLL 267
           S++M E  L+FL P+WWE                 F+ G+G       + +     GDL+
Sbjct: 64  SMEMIEEALHFLVPTWWEVEISVVAAVFVIITYWFFTFGNGEIDESQATGEGLIGAGDLI 123

Query: 266 DDKEKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPG 87
           DD  KM   KGD Q+NS YVIKLELLAAKNLIGANLNG SDPYAIITCGE+KRFSSMVPG
Sbjct: 124 DDNVKMXQLKGDPQTNSAYVIKLELLAAKNLIGANLNGMSDPYAIITCGEEKRFSSMVPG 183

Query: 86  SRNPMWGEEFNFFVNELPVQVNMTIYDW 3
           SRNPMWGEEFNF V++LPV++N+TIYDW
Sbjct: 184 SRNPMWGEEFNFSVDDLPVKINVTIYDW 211


>ref|XP_002531896.1| conserved hypothetical protein [Ricinus communis]
           gi|223528463|gb|EEF30495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 532

 Score =  173 bits (438), Expect = 1e-41
 Identities = 93/156 (59%), Positives = 105/156 (67%), Gaps = 12/156 (7%)
 Frame = -1

Query: 434 IKMTELILNFLFPSWWEXXXXXXXXXXXXXXXXXFS------SGD---GNTSRC---DNS 291
           + M + +L+FL PSWWE                  S       GD   G T R    +NS
Sbjct: 3   VMMMDSVLDFLVPSWWEIKVTVAAAVFVMSSYWFLSWSGGAGGGDIDGGGTDRSQMLENS 62

Query: 290 VDICGDLLDDKEKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQK 111
            +  GD +DDK KMG  KGD Q NS Y+IKLELLAAKNLIGANLNGTSDPYAIITCG +K
Sbjct: 63  GN-SGDGIDDKFKMGQLKGDPQGNSAYIIKLELLAAKNLIGANLNGTSDPYAIITCGSEK 121

Query: 110 RFSSMVPGSRNPMWGEEFNFFVNELPVQVNMTIYDW 3
           RFSSMVPGSRNPMWGEEFNF V+ELPVQ+ +TIYDW
Sbjct: 122 RFSSMVPGSRNPMWGEEFNFSVDELPVQIQVTIYDW 157


>ref|XP_003528491.1| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
           [Glycine max]
          Length = 585

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/147 (58%), Positives = 104/147 (70%), Gaps = 2/147 (1%)
 Frame = -1

Query: 437 SIKMTELILNFLFPSWWEXXXXXXXXXXXXXXXXXFS--SGDGNTSRCDNSVDICGDLLD 264
           ++ +   +  FLFPS WE                 F+  +G  + S  DNS    GD+ D
Sbjct: 2   NVTVDSALFAFLFPSAWEIKVAVAASVFVILAYRFFAVRTGYADPSLTDNSA---GDVAD 58

Query: 263 DKEKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGS 84
           +K+KMG  K DSQ++  Y+IKLELLAAKNL+GANLNGTSDPYAIITCG +KRFSSMVPGS
Sbjct: 59  EKDKMGQSKVDSQASLAYLIKLELLAAKNLVGANLNGTSDPYAIITCGNEKRFSSMVPGS 118

Query: 83  RNPMWGEEFNFFVNELPVQVNMTIYDW 3
           RNPMWGEEFNF V+ELPVQ+N+TIYDW
Sbjct: 119 RNPMWGEEFNFSVDELPVQINVTIYDW 145


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