BLASTX nr result

ID: Coptis23_contig00034961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034961
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003319337.1| terpenoid cylase/protein prenyltransferase a...    47   9e-09
ref|XP_003333781.1| terpenoid cylase/protein prenyltransferase a...    47   2e-08
gb|ABK28489.1| unknown [Arabidopsis thaliana]                          56   3e-08
ref|NP_178997.2| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-08
ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827...    46   1e-07

>ref|XP_003319337.1| terpenoid cylase/protein prenyltransferase alpha-alpha toroid
           [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 512

 Score = 47.0 bits (110), Expect(2) = 9e-09
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +1

Query: 382 HPKYPFDVFRRMFRMQHHLFIRILKVVYDHENYFTYKVDGIGKLYLTGMQ*VVACIWL 555
           +P YP  +FRR FRMQ  L+++I++ V   ++YF  K D  G+L  + +Q V A   L
Sbjct: 146 NPTYPDYLFRRRFRMQRTLYLKIVEAVSQEDDYFIQKRDAAGRLGFSPLQKVTAAFRL 203



 Score = 37.7 bits (86), Expect(2) = 9e-09
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +3

Query: 216 MVNDDENMLLPI---FSLLQNMFEASRDHQGSVTGRKYIYLDRIKAYNRIMRNYFVQNP 383
           ++ DD+ +L  +    +L+     A   H GS  GR+ IY +R++    +  +YF++NP
Sbjct: 89  LIEDDDEILASLSTSIALVVKRMNAKPKHGGSTVGRREIYRNRLQGDQMLYHDYFLENP 147


>ref|XP_003333781.1| terpenoid cylase/protein prenyltransferase alpha-alpha toroid
           [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 432

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +1

Query: 382 HPKYPFDVFRRMFRMQHHLFIRILKVVYDHENYFTYKVDGIGKLYLTGMQ*VVACIWL 555
           +P YP  +FRR FRMQ  L+++I++ V   ++YF  K D  G+L  + +Q V A   L
Sbjct: 66  NPTYPDYLFRRRFRMQRTLYLKIVEAVSQEDDYFIQKRDAAGRLGFSPLQKVTAAFRL 123



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 216 MVNDDENMLLPI---FSLLQNMFEASRDHQGSVTGRKYIYLDRIKAYNRIMRNYFVQNP 383
           ++ DD+ +L  +    +L+     A   H GS  GR+ IY +R++    +  +YF +NP
Sbjct: 9   LIEDDDEILASLSTSIALVVKRMNAKPKHGGSTVGRREIYRNRLQGDQMLYHDYFSENP 67


>gb|ABK28489.1| unknown [Arabidopsis thaliana]
          Length = 344

 Score = 55.8 bits (133), Expect(2) = 3e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 385 PKYPFDVFRRMFRMQHHLFIRILKVVYDHENYFTYKVDGIGKLYLTGMQ*VVA 543
           P +P  +FRR FRM   LF+RI   +  H+NYF  + DG+GKL L+G+Q + A
Sbjct: 86  PVFPETMFRRRFRMSRSLFLRIYDAIKRHDNYFVQRRDGVGKLGLSGLQKMTA 138



 Score = 27.3 bits (59), Expect(2) = 3e-08
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 252 FSLLQNMFEASRDHQGSVTGRKYIYLDRIKAYNRIMRNYFVQNP 383
           F   Q+++ +   H GS+ G   I  DR      +  +YF + P
Sbjct: 43  FLCSQHLYNSEGSHGGSIHGHVVINRDRENVARNLFIDYFAEKP 86


>ref|NP_178997.2| uncharacterized protein [Arabidopsis thaliana]
           gi|91806160|gb|ABE65808.1| hypothetical protein
           At2g13770 [Arabidopsis thaliana]
           gi|330251164|gb|AEC06258.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 55.8 bits (133), Expect(2) = 3e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +1

Query: 385 PKYPFDVFRRMFRMQHHLFIRILKVVYDHENYFTYKVDGIGKLYLTGMQ*VVA 543
           P +P  +FRR FRM   LF+RI   +  H+NYF  + DG+GKL L+G+Q + A
Sbjct: 86  PVFPETMFRRRFRMSRSLFLRIYDAIKRHDNYFVQRRDGVGKLGLSGLQKMTA 138



 Score = 27.3 bits (59), Expect(2) = 3e-08
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 252 FSLLQNMFEASRDHQGSVTGRKYIYLDRIKAYNRIMRNYFVQNP 383
           F   Q+++ +   H GS+ G   I  DR      +  +YF + P
Sbjct: 43  FLCSQHLYNSEGSHGGSIHGHVVINRDRENVARNLFIDYFAEKP 86


>ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827873 [Brachypodium
           distachyon]
          Length = 423

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +1

Query: 382 HPKYPFDVFRRMFRMQHHLFIRILKVVYDHENYFTYKVDGIGKLYLTGMQ 531
           HP Y    FRR FRM   LF RI+K + +H++YF  K +   KL L+ +Q
Sbjct: 68  HPVYGPSYFRRRFRMARPLFFRIVKAMREHDSYFVQKRNAARKLGLSSLQ 117



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 267 NMFEASRDHQGSVTGRKYIYLDRIKAYNRIMRNYFVQNP 383
           NM   +R   GSV GR+ I  DR+  + R+  +YF Q+P
Sbjct: 31  NMRFNARRRGGSVLGRQVINRDRVAGHGRLFEDYFTQHP 69


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