BLASTX nr result

ID: Coptis23_contig00034955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034955
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594727.1| Pectinesterase [Medicago truncatula] gi|3554...   166   1e-39
ref|XP_003533150.1| PREDICTED: probable pectinesterase 67-like [...   161   4e-38
gb|ACU23222.1| unknown [Glycine max]                                  160   1e-37
ref|XP_002885186.1| pectinesterase family protein [Arabidopsis l...   154   5e-36
ref|NP_188331.1| putative pectinesterase 67 [Arabidopsis thalian...   154   7e-36

>ref|XP_003594727.1| Pectinesterase [Medicago truncatula] gi|355483775|gb|AES64978.1|
           Pectinesterase [Medicago truncatula]
          Length = 350

 Score =  166 bits (421), Expect = 1e-39
 Identities = 74/101 (73%), Positives = 88/101 (87%)
 Frame = +1

Query: 58  LMQDCEIFVVSDDRVEIGGSITAQNRQTAGEDSDFVFIEGRVYGIGGVYLGRAKGAYSRV 237
           + Q+CEIFVV D R+ I GSITA NR+   E S F+FI+G+VYGIGGVYLGRAKG YSRV
Sbjct: 215 IFQNCEIFVVDDKRISIRGSITAANRENESEMSGFIFIKGKVYGIGGVYLGRAKGPYSRV 274

Query: 238 LFAKTYLSKTIVPHGWTNWSYNGTTKNIYHAEYKCHGPGSI 360
           +FAKTYLSKTIVP GWTNWSY+G+T+++YHAEYKCHGPG+I
Sbjct: 275 IFAKTYLSKTIVPEGWTNWSYDGSTEHLYHAEYKCHGPGAI 315


>ref|XP_003533150.1| PREDICTED: probable pectinesterase 67-like [Glycine max]
          Length = 346

 Score =  161 bits (408), Expect = 4e-38
 Identities = 71/101 (70%), Positives = 88/101 (87%)
 Frame = +1

Query: 58  LMQDCEIFVVSDDRVEIGGSITAQNRQTAGEDSDFVFIEGRVYGIGGVYLGRAKGAYSRV 237
           +    +IFVV D RV I GS+TAQNR++ GE S F+FI+G+VYGIGGVYLGRAKG YSRV
Sbjct: 211 IFHKADIFVVDDKRVTIKGSVTAQNRESEGEMSGFIFIKGKVYGIGGVYLGRAKGPYSRV 270

Query: 238 LFAKTYLSKTIVPHGWTNWSYNGTTKNIYHAEYKCHGPGSI 360
           +FA+TYLSKTIVP GWTNWSY+G+TK++YHAEY+CHGPG++
Sbjct: 271 IFAETYLSKTIVPEGWTNWSYDGSTKDLYHAEYECHGPGAL 311


>gb|ACU23222.1| unknown [Glycine max]
          Length = 346

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/101 (69%), Positives = 87/101 (86%)
 Frame = +1

Query: 58  LMQDCEIFVVSDDRVEIGGSITAQNRQTAGEDSDFVFIEGRVYGIGGVYLGRAKGAYSRV 237
           +    +IFVV D RV I GS+TAQNR++ GE S F+FI+G+VYGIGGVYLGRAKG YSRV
Sbjct: 211 IFHKADIFVVDDKRVTIKGSVTAQNRESEGEMSGFIFIKGKVYGIGGVYLGRAKGPYSRV 270

Query: 238 LFAKTYLSKTIVPHGWTNWSYNGTTKNIYHAEYKCHGPGSI 360
           +F +TYLSKTIVP GWTNWSY+G+TK++YHAEY+CHGPG++
Sbjct: 271 IFVETYLSKTIVPEGWTNWSYDGSTKDLYHAEYECHGPGAL 311


>ref|XP_002885186.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331026|gb|EFH61445.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  154 bits (390), Expect = 5e-36
 Identities = 68/100 (68%), Positives = 85/100 (85%)
 Frame = +1

Query: 58  LMQDCEIFVVSDDRVEIGGSITAQNRQTAGEDSDFVFIEGRVYGIGGVYLGRAKGAYSRV 237
           +  +CEIFV+SD RV+  GSITA +R+ A E++ +VFI G+VYGI  VYLGRAKG YSRV
Sbjct: 205 IFNNCEIFVISDKRVKPYGSITAHHRENAEENTGYVFIRGKVYGIDEVYLGRAKGPYSRV 264

Query: 238 LFAKTYLSKTIVPHGWTNWSYNGTTKNIYHAEYKCHGPGS 357
           +FAKTYLSKT+VP GWTNWSY+G+T+N+YH EYKCHGPG+
Sbjct: 265 IFAKTYLSKTVVPDGWTNWSYHGSTENLYHGEYKCHGPGA 304


>ref|NP_188331.1| putative pectinesterase 67 [Arabidopsis thaliana]
           gi|75311531|sp|Q9LSP1.1|PME67_ARATH RecName:
           Full=Probable pectinesterase 67; Short=PE 67; AltName:
           Full=Pectin methylesterase 67; Short=AtPME67; Flags:
           Precursor gi|7670030|dbj|BAA94984.1| pectinesterase-like
           protein [Arabidopsis thaliana]
           gi|21553361|gb|AAM62454.1| pectinesterase, putative
           [Arabidopsis thaliana] gi|26451762|dbj|BAC42976.1|
           putative pectinesterase [Arabidopsis thaliana]
           gi|28973561|gb|AAO64105.1| putative pectinesterase
           [Arabidopsis thaliana] gi|332642378|gb|AEE75899.1|
           putative pectinesterase 67 [Arabidopsis thaliana]
          Length = 344

 Score =  154 bits (389), Expect = 7e-36
 Identities = 68/100 (68%), Positives = 85/100 (85%)
 Frame = +1

Query: 58  LMQDCEIFVVSDDRVEIGGSITAQNRQTAGEDSDFVFIEGRVYGIGGVYLGRAKGAYSRV 237
           +  +CEIFV+SD RV+  GSITA +R++A E + +VFI G+VYGI  VYLGRAKG YSRV
Sbjct: 205 IFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYGIDEVYLGRAKGPYSRV 264

Query: 238 LFAKTYLSKTIVPHGWTNWSYNGTTKNIYHAEYKCHGPGS 357
           +FAKTYLSKT+VP GWTNWSY+G+T+N+YH EYKCHGPG+
Sbjct: 265 IFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGA 304


Top