BLASTX nr result
ID: Coptis23_contig00034947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00034947
(237 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002445199.1| hypothetical protein SORBIDRAFT_07g005780 [S... 127 7e-28
pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In T... 127 9e-28
gb|AFW56970.1| hypothetical protein ZEAMMB73_326876 [Zea mays] 127 9e-28
gb|AFW56968.1| polyamine oxidase Precursor [Zea mays] 127 9e-28
gb|AFW56966.1| hypothetical protein ZEAMMB73_326876 [Zea mays] 127 9e-28
>ref|XP_002445199.1| hypothetical protein SORBIDRAFT_07g005780 [Sorghum bicolor]
gi|241941549|gb|EES14694.1| hypothetical protein
SORBIDRAFT_07g005780 [Sorghum bicolor]
Length = 560
Score = 127 bits (320), Expect = 7e-28
Identities = 53/70 (75%), Positives = 63/70 (90%)
Frame = +3
Query: 3 GTYSNWPIGVTRYEYDQIRAPVGRIYFTGEHTSEQYNGYVHGAYLAGIDTANLLINCVKK 182
GT+SNWPIGV RYEYDQ+RAPVGR+YFTGEHTSE YNGYVHGAYL+GID+A +LINC +K
Sbjct: 489 GTFSNWPIGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 548
Query: 183 KLCKFQIMPK 212
K+CK+ + K
Sbjct: 549 KMCKYHVQGK 558
>pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase gi|6730083|pdb|1B37|B
Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel In The
Crystal Structure Of Polyamine Oxidase
gi|6730084|pdb|1B37|C Chain C, A 30 Angstrom U-Shaped
Catalytic Tunnel In The Crystal Structure Of Polyamine
Oxidase gi|6980739|pdb|1B5Q|A Chain A, A 30 Angstrom
U-Shaped Catalytic Tunnel In The Crystal Structure Of
Polyamine Oxidase gi|6980740|pdb|1B5Q|B Chain B, A 30
Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase gi|6980741|pdb|1B5Q|C
Chain C, A 30 Angstrom U-Shaped Catalytic Tunnel In The
Crystal Structure Of Polyamine Oxidase
gi|13096271|pdb|1H81|A Chain A, Structure Of Polyamine
Oxidase In The Reduced State gi|13096272|pdb|1H81|B
Chain B, Structure Of Polyamine Oxidase In The Reduced
State gi|13096273|pdb|1H81|C Chain C, Structure Of
Polyamine Oxidase In The Reduced State
gi|13096274|pdb|1H82|A Chain A, Structure Of Polyamine
Oxidase In Complex With Guazatine gi|13096275|pdb|1H82|B
Chain B, Structure Of Polyamine Oxidase In Complex With
Guazatine gi|13096276|pdb|1H82|C Chain C, Structure Of
Polyamine Oxidase In Complex With Guazatine
gi|13096277|pdb|1H83|A Chain A, Structure Of Polyamine
Oxidase In Complex With 1,8- Diaminooctane
gi|13096278|pdb|1H83|B Chain B, Structure Of Polyamine
Oxidase In Complex With 1,8- Diaminooctane
gi|13096279|pdb|1H83|C Chain C, Structure Of Polyamine
Oxidase In Complex With 1,8- Diaminooctane
gi|13096280|pdb|1H84|A Chain A, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
gi|13096281|pdb|1H84|B Chain B, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
gi|13096282|pdb|1H84|C Chain C, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
gi|13096283|pdb|1H86|A Chain A, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
gi|13096284|pdb|1H86|B Chain B, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
gi|13096285|pdb|1H86|C Chain C, Covalent Adduct Between
Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
Length = 472
Score = 127 bits (319), Expect = 9e-28
Identities = 52/70 (74%), Positives = 63/70 (90%)
Frame = +3
Query: 3 GTYSNWPIGVTRYEYDQIRAPVGRIYFTGEHTSEQYNGYVHGAYLAGIDTANLLINCVKK 182
GT+SNWP+GV RYEYDQ+RAPVGR+YFTGEHTSE YNGYVHGAYL+GID+A +LINC +K
Sbjct: 401 GTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460
Query: 183 KLCKFQIMPK 212
K+CK+ + K
Sbjct: 461 KMCKYHVQGK 470
>gb|AFW56970.1| hypothetical protein ZEAMMB73_326876 [Zea mays]
Length = 396
Score = 127 bits (319), Expect = 9e-28
Identities = 52/70 (74%), Positives = 63/70 (90%)
Frame = +3
Query: 3 GTYSNWPIGVTRYEYDQIRAPVGRIYFTGEHTSEQYNGYVHGAYLAGIDTANLLINCVKK 182
GT+SNWP+GV RYEYDQ+RAPVGR+YFTGEHTSE YNGYVHGAYL+GID+A +LINC +K
Sbjct: 325 GTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 384
Query: 183 KLCKFQIMPK 212
K+CK+ + K
Sbjct: 385 KMCKYHVQGK 394
>gb|AFW56968.1| polyamine oxidase Precursor [Zea mays]
Length = 500
Score = 127 bits (319), Expect = 9e-28
Identities = 52/70 (74%), Positives = 63/70 (90%)
Frame = +3
Query: 3 GTYSNWPIGVTRYEYDQIRAPVGRIYFTGEHTSEQYNGYVHGAYLAGIDTANLLINCVKK 182
GT+SNWP+GV RYEYDQ+RAPVGR+YFTGEHTSE YNGYVHGAYL+GID+A +LINC +K
Sbjct: 429 GTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 488
Query: 183 KLCKFQIMPK 212
K+CK+ + K
Sbjct: 489 KMCKYHVQGK 498
>gb|AFW56966.1| hypothetical protein ZEAMMB73_326876 [Zea mays]
Length = 313
Score = 127 bits (319), Expect = 9e-28
Identities = 52/70 (74%), Positives = 63/70 (90%)
Frame = +3
Query: 3 GTYSNWPIGVTRYEYDQIRAPVGRIYFTGEHTSEQYNGYVHGAYLAGIDTANLLINCVKK 182
GT+SNWP+GV RYEYDQ+RAPVGR+YFTGEHTSE YNGYVHGAYL+GID+A +LINC +K
Sbjct: 242 GTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 301
Query: 183 KLCKFQIMPK 212
K+CK+ + K
Sbjct: 302 KMCKYHVQGK 311