BLASTX nr result

ID: Coptis23_contig00034944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034944
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus c...   141   6e-32
gb|AFK41115.1| unknown [Medicago truncatula]                          140   8e-32
ref|XP_003591494.1| Endo-1 4-beta-glucanase [Medicago truncatula...   140   8e-32
gb|ACJ83779.1| unknown [Medicago truncatula]                          140   8e-32

>ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1|
           predicted protein [Populus trichocarpa]
           gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466627|gb|AEO97226.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 510

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/76 (84%), Positives = 73/76 (96%)
 Frame = -3

Query: 318 SVAAHPAKIQCSSGFSAMSSQAPNPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNA 139
           S+AAHPAKIQCSSGFS M+SQ+PNPNIL+GA+VGGPD HD+FPD+RSDYEQSEP+TY NA
Sbjct: 435 SMAAHPAKIQCSSGFSVMNSQSPNPNILVGAIVGGPDEHDRFPDERSDYEQSEPATYMNA 494

Query: 138 PLVGSLAYLAHSFGQL 91
           PLVG+LAYLAHSFGQL
Sbjct: 495 PLVGALAYLAHSFGQL 510


>ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223537676|gb|EEF39299.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 510

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -3

Query: 318 SVAAHPAKIQCSSGFSAMSSQAPNPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNA 139
           S++ HPAKIQCSSGFS M+SQ+PNPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NA
Sbjct: 435 SISVHPAKIQCSSGFSIMNSQSPNPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYINA 494

Query: 138 PLVGSLAYLAHSFGQL 91
           PLVG+LAYLAHSFGQL
Sbjct: 495 PLVGALAYLAHSFGQL 510


>gb|AFK41115.1| unknown [Medicago truncatula]
          Length = 159

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = -3

Query: 318 SVAAHPAKIQCSSGFSAMSSQAPNPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNA 139
           S+A HP KIQCS+GFS MSSQ+PNPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NA
Sbjct: 84  SMAVHPGKIQCSAGFSVMSSQSPNPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNA 143

Query: 138 PLVGSLAYLAHSFGQL 91
           PLVG+LAYLAHSFGQL
Sbjct: 144 PLVGTLAYLAHSFGQL 159


>ref|XP_003591494.1| Endo-1 4-beta-glucanase [Medicago truncatula]
           gi|355480542|gb|AES61745.1| Endo-1 4-beta-glucanase
           [Medicago truncatula]
          Length = 485

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = -3

Query: 318 SVAAHPAKIQCSSGFSAMSSQAPNPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNA 139
           S+A HP KIQCS+GFS MSSQ+PNPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NA
Sbjct: 410 SMAVHPGKIQCSAGFSVMSSQSPNPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNA 469

Query: 138 PLVGSLAYLAHSFGQL 91
           PLVG+LAYLAHSFGQL
Sbjct: 470 PLVGTLAYLAHSFGQL 485


>gb|ACJ83779.1| unknown [Medicago truncatula]
          Length = 99

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = -3

Query: 318 SVAAHPAKIQCSSGFSAMSSQAPNPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNA 139
           S+A HP KIQCS+GFS MSSQ+PNPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NA
Sbjct: 24  SMAVHPGKIQCSAGFSVMSSQSPNPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNA 83

Query: 138 PLVGSLAYLAHSFGQL 91
           PLVG+LAYLAHSFGQL
Sbjct: 84  PLVGTLAYLAHSFGQL 99


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