BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034942
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis mel...   186   3e-45
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   176   2e-42
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   173   3e-41

>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  206 bits (524), Expect = 3e-51
 Identities = 124/225 (55%), Positives = 143/225 (63%), Gaps = 14/225 (6%)
 Frame = -2

Query: 634  KNLRKIMEAGGEPLALMSQLATIITDILAGSYVFTKERLRRKFFRRPTLSKDDMEKLRQA 455
            KNLR IME G EPLALMSQLAT+ITDILAGSY FTKER RRKFFRR  LSKDDMEKLRQA
Sbjct: 713  KNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKERPRRKFFRRNPLSKDDMEKLRQA 772

Query: 454  LKTLSEAEKQLRTSNDKXXXXXXXXXXXAPDQQYLLPSSSTETSYNHSPPVLPNTSQQDF 275
            LKTLSEAEKQLR SNDK           APDQQYLLPSSSTETS+NHSP  L N   +D 
Sbjct: 773  LKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYLLPSSSTETSFNHSPLALNNMGGRDI 832

Query: 274  SRRGTAEHPQMSNYERGLLAR----------RTDIRHSGSTHDVLHDENVDRNNNNIGGK 125
            +R+G  E  +M N +RGL               + ++SGST+ +    N+DR  N   G 
Sbjct: 833  ARKG-GERVEMPNNKRGLSTHVRLENLPGGTSANFQNSGSTNGI----NMDRKRNAASGM 887

Query: 124  ----KHAGITDVTRAGGEHVLRKGHKEIEKIWFAVLEKIQISTLK 2
                     +D  R  G  V  K  K  E+IW  VLEKIQI++++
Sbjct: 888  ASQWTSVQTSDAVRVNGRQVSGKSRKGHEEIWLEVLEKIQINSMR 932


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  197 bits (501), Expect = 1e-48
 Identities = 122/223 (54%), Positives = 141/223 (63%), Gaps = 12/223 (5%)
 Frame = -2

Query: 634  KNLRKIMEAGGEPLALMSQLATIITDILAGSYVFTKERLRRKFFRRPTLSKDDMEKLRQA 455
            KNLR IME G EPLALMSQLAT+ITDILAGSY FTKER RRKFFRR  LSK+DMEKLRQA
Sbjct: 709  KNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKERPRRKFFRRKPLSKEDMEKLRQA 768

Query: 454  LKTLSEAEKQLRTSNDKXXXXXXXXXXXAPDQQYLLPSSSTETSYNHSPPVLPNTSQQDF 275
            LKTLSEAEKQLR SNDK           APDQQYLLPSSSTETS+NHSP    N   +D 
Sbjct: 769  LKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYLLPSSSTETSFNHSPLAQNNMGGRDI 828

Query: 274  SRRGTAEHPQMSNYERGLL----------ARRTDIRHSGSTHDVLHDENVDRNNNNIGGK 125
            SR+G  EH +M N  R L               D R++GST+    D    RN  ++   
Sbjct: 829  SRKG-GEH-EMPNNGRDLPMHVRLESLPGGTSADFRNNGSTNGTSIDRK--RNAASVMAP 884

Query: 124  KHAGI--TDVTRAGGEHVLRKGHKEIEKIWFAVLEKIQISTLK 2
            +   +  +D  R     V  K HK  E+IW  VLEKIQI++++
Sbjct: 885  QWTPVQTSDAIRVNSRQVSGKSHKGYEEIWLEVLEKIQINSMR 927


>gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis melo subsp. melo]
          Length = 1170

 Score =  186 bits (472), Expect = 3e-45
 Identities = 114/222 (51%), Positives = 146/222 (65%), Gaps = 11/222 (4%)
 Frame = -2

Query: 634  KNLRKIMEAGGEPLALMSQLATIITDILAGSYVFTKERLRRKFFRRPTLSKDDMEKLRQA 455
            K+LR I+E+G EP+ALMSQ+AT+ITDILAGSY F KER RRKFFRR  LSK+DMEKLRQA
Sbjct: 716  KHLRLIIESGVEPMALMSQIATVITDILAGSYDFKKERPRRKFFRRQPLSKEDMEKLRQA 775

Query: 454  LKTLSEAEKQLRTSNDKXXXXXXXXXXXAPDQQYLLPSSSTETSYNHSPPVLPNTSQQDF 275
            LKTLSEAEKQLR SNDK           APDQQY+L SSS ETS+NHSP  L N S +  
Sbjct: 776  LKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYML-SSSAETSFNHSPLALNNVSGRGA 834

Query: 274  SRRGTAEHPQMSNYERGLLARRTDIRHSGSTHDVLHDENVDRNNNNIGGKKHAGI----- 110
            S R   +H Q+S  E+GL    TD++ +G  H    D  + +   ++  K+H+G+     
Sbjct: 835  S-RNVDQHGQISAGEKGL---PTDVKFAG--HSDSFDNRISK-GISLDRKRHSGVCVSPQ 887

Query: 109  ------TDVTRAGGEHVLRKGHKEIEKIWFAVLEKIQISTLK 2
                  TD+ ++ G+ V    HK IE+IW  VL KI+I+++K
Sbjct: 888  RTIGTATDLMKSSGKQVSGTTHKAIEEIWLEVLGKIRINSIK 929


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  176 bits (447), Expect = 2e-42
 Identities = 111/211 (52%), Positives = 123/211 (58%)
 Frame = -2

Query: 634  KNLRKIMEAGGEPLALMSQLATIITDILAGSYVFTKERLRRKFFRRPTLSKDDMEKLRQA 455
            KNLR+IME G EPLALMSQLAT+ITDILAGSY FTKERLRRKFFRR  LSK+DMEKLRQA
Sbjct: 717  KNLREIMETGVEPLALMSQLATVITDILAGSYDFTKERLRRKFFRRQALSKEDMEKLRQA 776

Query: 454  LKTLSEAEKQLRTSNDKXXXXXXXXXXXAPDQQYLLPSSSTETSYNHSPPVLPNTSQQDF 275
            LKTLSEAEKQLR SNDK           APDQQY+LPSSS +TS+NHS P++PN S    
Sbjct: 777  LKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPSSSADTSFNHS-PLVPNNSS--- 832

Query: 274  SRRGTAEHPQMSNYERGLLARRTDIRHSGSTHDVLHDENVDRNNNNIGGKKHAGITDVTR 95
                                      HS  T             N + GK+  G      
Sbjct: 833  -------------------------AHSADT-------------NRLSGKQIPG------ 848

Query: 94   AGGEHVLRKGHKEIEKIWFAVLEKIQISTLK 2
                    K  KEIE+IW  VLEKIQ+ TLK
Sbjct: 849  --------KVRKEIEEIWLEVLEKIQVDTLK 871


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  173 bits (438), Expect = 3e-41
 Identities = 109/217 (50%), Positives = 139/217 (64%), Gaps = 6/217 (2%)
 Frame = -2

Query: 634  KNLRKIMEAGGEPLALMSQLATIITDILAGSYVFTKERLRRKFFRRPTLSKDDMEKLRQA 455
            KNLR IME G EPLALMSQLAT+ITDILAG+Y F K+R RRKFFRRP LSK+DMEKLRQA
Sbjct: 717  KNLRVIMETGVEPLALMSQLATVITDILAGTYDFRKDRRRRKFFRRPLLSKEDMEKLRQA 776

Query: 454  LKTLSEAEKQLRTSNDKXXXXXXXXXXXAPDQQYLLPSSSTETSYNHSPPVLPNTSQQDF 275
            LKTLSEAEKQLR SNDK           APDQQY+LP+SS + S+NHSP  L +   ++ 
Sbjct: 777  LKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYVLPTSS-DNSFNHSPFALKDADAREA 835

Query: 274  SRRGTAEHPQMSNYERGL-LARRTDIRHSGSTHD-VLHDENVDRNNNNIGG--KKHAG-- 113
            +R  T     + N  R L +  R +  H+GS+ D +      ++  +++ G   +HA   
Sbjct: 836  ARL-TGNPVDIPNKGRRLSMDARIENVHAGSSADGMTRGLGSEKKRHSVSGFTPQHANSQ 894

Query: 112  ITDVTRAGGEHVLRKGHKEIEKIWFAVLEKIQISTLK 2
             T+  R     +L     +IE+IW  VLE+IQI+ LK
Sbjct: 895  ATEKIRMSERQILGINRTKIEEIWLEVLERIQITGLK 931