BLASTX nr result

ID: Coptis23_contig00034936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034936
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15253.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   124   8e-27
ref|XP_002511544.1| abc transporter, putative [Ricinus communis]...   124   1e-26
ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7...   123   2e-26
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...   122   4e-26

>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/93 (67%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = -3

Query: 276 KNFQKKRSLS-FKWSSWGGQGSKVSVRMEKSDVSLEREKVKQLLLESSINYAIISDDLKK 100
           +NF+KK+ +S F+  S   QGSKV V+MEK+DVS EREKV+QLLLES  N+AII D+L+K
Sbjct: 554 QNFRKKKPMSSFRKPSLKRQGSKVFVKMEKADVSQEREKVEQLLLESGANHAIICDNLRK 613

Query: 99  MYPGKDGNPGKFAVKGMSLALPQGECFGMLGPN 1
           +YPG+DGNP K AVKG+SLAL  GECFGMLGPN
Sbjct: 614 VYPGRDGNPEKIAVKGLSLALSHGECFGMLGPN 646


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/93 (67%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = -3

Query: 276 KNFQKKRSLS-FKWSSWGGQGSKVSVRMEKSDVSLEREKVKQLLLESSINYAIISDDLKK 100
           +NF+KK+ +S F+  S   QGSKV V+MEK+DVS EREKV+QLLLES  N+AII D+L+K
Sbjct: 575 QNFRKKKPMSSFRKPSLKRQGSKVFVKMEKADVSQEREKVEQLLLESGANHAIICDNLRK 634

Query: 99  MYPGKDGNPGKFAVKGMSLALPQGECFGMLGPN 1
           +YPG+DGNP K AVKG+SLAL  GECFGMLGPN
Sbjct: 635 VYPGRDGNPEKIAVKGLSLALSHGECFGMLGPN 667


>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
           gi|223550659|gb|EEF52146.1| abc transporter, putative
           [Ricinus communis]
          Length = 984

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/92 (65%), Positives = 75/92 (81%)
 Frame = -3

Query: 276 KNFQKKRSLSFKWSSWGGQGSKVSVRMEKSDVSLEREKVKQLLLESSINYAIISDDLKKM 97
           +NF+KKR +SF+  S   QGSKV V M+K DV+ EREKV+QLLLE +  +AI+ D+LKK+
Sbjct: 611 QNFRKKRPISFRRPSLRRQGSKVFVDMDKPDVTQEREKVEQLLLEPNTTHAIVCDNLKKV 670

Query: 96  YPGKDGNPGKFAVKGMSLALPQGECFGMLGPN 1
           YPG+DGNP K AV+G+SLALP GECFGMLGPN
Sbjct: 671 YPGRDGNPEKLAVRGLSLALPPGECFGMLGPN 702


>ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7-like [Cucumis sativus]
           gi|449477292|ref|XP_004154983.1| PREDICTED: ABC
           transporter A family member 7-like [Cucumis sativus]
          Length = 947

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -3

Query: 276 KNFQKKRSLSFKWSSWGGQGSKVSVRMEKSDVSLEREKVKQLLLESSINYAIISDDLKKM 97
           + F+KK + SF+  S   QGSKV V+ME+SDV  EREKV+QLLL+   ++AI+ D+LKK+
Sbjct: 574 RRFRKKAAASFRLPSLRKQGSKVFVQMEQSDVIQEREKVEQLLLDPDASHAIVCDNLKKV 633

Query: 96  YPGKDGNPGKFAVKGMSLALPQGECFGMLGPN 1
           YPG+DGNP KFAVKG+SLA+P+GECFGMLGPN
Sbjct: 634 YPGRDGNPEKFAVKGLSLAVPRGECFGMLGPN 665


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/92 (65%), Positives = 75/92 (81%)
 Frame = -3

Query: 276 KNFQKKRSLSFKWSSWGGQGSKVSVRMEKSDVSLEREKVKQLLLESSINYAIISDDLKKM 97
           K FQKK   SF+  S   Q SKV V++EK DV+ EREKV++LLLES+IN AI+ D+++K+
Sbjct: 576 KRFQKKPHSSFRKPSIQRQKSKVFVQIEKPDVTQEREKVEELLLESTINQAIVCDNMRKV 635

Query: 96  YPGKDGNPGKFAVKGMSLALPQGECFGMLGPN 1
           YPG+DGNP K AV+G+SLALPQGECFGMLGPN
Sbjct: 636 YPGRDGNPEKLAVRGLSLALPQGECFGMLGPN 667


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