BLASTX nr result

ID: Coptis23_contig00034912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034912
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [V...   171   5e-41
ref|XP_002519094.1| AT14A, putative [Ricinus communis] gi|223541...   171   5e-41
ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41
ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [G...   162   3e-38

>ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|222849472|gb|EEE87019.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  173 bits (438), Expect = 2e-41
 Identities = 87/119 (73%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
 Frame = +3

Query: 171 MGGHMSKKTGEAPSV-LDLHGRLEYTAGLSSYEDECRLDPELQSFDATLQDRTHRVINSL 347
           MGGH+SK+  EA S  ++L+  L+YT GLSSYE  C LD +LQSFD TLQ RT+ VIN+L
Sbjct: 1   MGGHVSKRPAEASSSSINLNNNLQYTTGLSSYEAACLLDKDLQSFDTTLQARTNHVINTL 60

Query: 348 AAGVEVRALSIDSLKEVTGCLLDMNQEVVKIILDCKQDIWKNQELFELVEDYFENSLQT 524
           A GVEVRALS DSLKEVT CLL+MNQEVVK+IL+CK+DIWKNQELFELVE+YFENSLQT
Sbjct: 61  AVGVEVRALSFDSLKEVTECLLEMNQEVVKVILECKRDIWKNQELFELVEEYFENSLQT 119


>ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]
          Length = 373

 Score =  171 bits (434), Expect = 5e-41
 Identities = 84/118 (71%), Positives = 98/118 (83%)
 Frame = +3

Query: 171 MGGHMSKKTGEAPSVLDLHGRLEYTAGLSSYEDECRLDPELQSFDATLQDRTHRVINSLA 350
           MGGHMSKK+ E  S + ++  L Y+  LSSYE  CR+D +LQSFD TLQ RT  VIN+LA
Sbjct: 1   MGGHMSKKSAETSSAITINPNLHYSTELSSYEAACRVDTDLQSFDTTLQARTSHVINTLA 60

Query: 351 AGVEVRALSIDSLKEVTGCLLDMNQEVVKIILDCKQDIWKNQELFELVEDYFENSLQT 524
            GVEVRALS +SLKEVT CLL+MNQEVVK+IL+CK+DIWKNQELFELVE+YFENSLQT
Sbjct: 61  VGVEVRALSFNSLKEVTECLLEMNQEVVKVILECKKDIWKNQELFELVEEYFENSLQT 118


>ref|XP_002519094.1| AT14A, putative [Ricinus communis] gi|223541757|gb|EEF43305.1|
           AT14A, putative [Ricinus communis]
          Length = 380

 Score =  171 bits (434), Expect = 5e-41
 Identities = 85/119 (71%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
 Frame = +3

Query: 171 MGGHMSKKTGEAPS-VLDLHGRLEYTAGLSSYEDECRLDPELQSFDATLQDRTHRVINSL 347
           MGGH+SKKT EA S  +++H  L+Y   LSSYE  C+LD +LQSFD +LQ RT+ VIN+L
Sbjct: 1   MGGHVSKKTTEASSSAINIHNNLQYITELSSYEAACKLDEDLQSFDTSLQVRTNHVINTL 60

Query: 348 AAGVEVRALSIDSLKEVTGCLLDMNQEVVKIILDCKQDIWKNQELFELVEDYFENSLQT 524
           A GVEVR+LS DSLKEVT CLL+MNQEVVK+IL+CK+DIWKNQELFELVE+YFENSLQT
Sbjct: 61  AVGVEVRSLSFDSLKEVTECLLEMNQEVVKVILECKKDIWKNQELFELVEEYFENSLQT 119


>ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|222849047|gb|EEE86594.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  171 bits (433), Expect = 6e-41
 Identities = 85/119 (71%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
 Frame = +3

Query: 171 MGGHMSKKTGEAPS-VLDLHGRLEYTAGLSSYEDECRLDPELQSFDATLQDRTHRVINSL 347
           MGGH+SK+  EA S  ++L+  L+YT  LSSYE  CRLD +LQSFD TLQ RT+ VIN+L
Sbjct: 1   MGGHVSKRPAEASSSAINLNNNLQYTTELSSYEAACRLDKDLQSFDTTLQARTNHVINTL 60

Query: 348 AAGVEVRALSIDSLKEVTGCLLDMNQEVVKIILDCKQDIWKNQELFELVEDYFENSLQT 524
           A G+EVRALS DSLKEVT CLL+MNQEVVK+IL+CK+DIWK+QELFELVE+YFENSLQT
Sbjct: 61  AVGIEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKDQELFELVEEYFENSLQT 119


>ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 374

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/118 (69%), Positives = 96/118 (81%)
 Frame = +3

Query: 171 MGGHMSKKTGEAPSVLDLHGRLEYTAGLSSYEDECRLDPELQSFDATLQDRTHRVINSLA 350
           MG HMSKK  E  S+  L   L Y   LSSYE  C+LD +LQSFD TLQ RT++VIN+LA
Sbjct: 1   MGSHMSKKIPETSSI-GLSTELHYKTELSSYEAACKLDSDLQSFDTTLQARTNQVINTLA 59

Query: 351 AGVEVRALSIDSLKEVTGCLLDMNQEVVKIILDCKQDIWKNQELFELVEDYFENSLQT 524
            GVEVRALS DSLK++T CLL+MNQEVVK+ILDCK+DIWK+QELFELVE+YFENSL+T
Sbjct: 60  VGVEVRALSFDSLKQITECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLKT 117


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