BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034889
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    58   7e-07

>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = -1

Query: 273 EKAVEMNWGCIWIESDSKAAIKAF-NGDAIP*LFRARWKRAIAFLQHWK--LSHVWREGN 103
           EK++E N   IW+E+DSK  +KAF + + +P   R RW   +A  Q  K   +H+ REGN
Sbjct: 65  EKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGN 124

Query: 102 FSADAAAIKGSTLLPDTSI*STSRPDF 22
             AD+ A  G +L   TS   +S P F
Sbjct: 125 AGADSLAKNGKSLALLTSQWWSSSPLF 151