BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034884
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]   130   1e-28
ref|XP_002531295.1| pentatricopeptide repeat-containing protein,...   122   2e-26
ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25

>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
           [Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
           protein product [Vitis vinifera]
          Length = 471

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/100 (65%), Positives = 79/100 (79%)
 Frame = +3

Query: 6   LQEAYNFVIEMPLQPDKILWRSLLAACKIHGNSAMGEKVGKHLLQLQEESGMVDTVSRCE 185
           L+EAY+FV  MP++PD ILWRSLL+ACK+H +  MGE+VGK LLQLQ +    D V+  E
Sbjct: 369 LKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQPQQSFADLVAASE 428

Query: 186 DFIALSNVYASAGRWKDLEMVREKMKDKCIQTEPGYSSVQ 305
           DFIALSNVYASA RW+D+E VRE MK K I+T+PG SSVQ
Sbjct: 429 DFIALSNVYASAERWEDVETVREAMKVKGIETKPGCSSVQ 468


>emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]
          Length = 437

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/100 (65%), Positives = 79/100 (79%)
 Frame = +3

Query: 6   LQEAYNFVIEMPLQPDKILWRSLLAACKIHGNSAMGEKVGKHLLQLQEESGMVDTVSRCE 185
           L+EAY+FV  MP++PD ILWRSLL+ACK+H +  MGE+VGK LLQLQ +    D V+  E
Sbjct: 335 LKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQPQQSFADLVAASE 394

Query: 186 DFIALSNVYASAGRWKDLEMVREKMKDKCIQTEPGYSSVQ 305
           DFIALSNVYASA RW+D+E VRE MK K I+T+PG SSVQ
Sbjct: 395 DFIALSNVYASAERWEDVETVREAMKVKGIETKPGCSSVQ 434


>ref|XP_002531295.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529128|gb|EEF31108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 313

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/102 (55%), Positives = 78/102 (76%)
 Frame = +3

Query: 6   LQEAYNFVIEMPLQPDKILWRSLLAACKIHGNSAMGEKVGKHLLQLQEESGMVDTVSRCE 185
           L+EAY F+  MP++PD ILWR LL+ACK+HG+  MGEKV K LL LQ E   V++    E
Sbjct: 203 LKEAYEFIAGMPMEPDAILWRCLLSACKVHGDVVMGEKVAKILLHLQPEKNSVESDDSSE 262

Query: 186 DFIALSNVYASAGRWKDLEMVREKMKDKCIQTEPGYSSVQLV 311
           D++ALSNVYASA RW+D+E++R++MK K ++T+PG S VQ +
Sbjct: 263 DYVALSNVYASAERWEDVEILRKEMKVKRLETKPGASLVQAI 304


>ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Glycine max]
          Length = 595

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   RLQEAYNFVIEMPLQPDKILWRSLLAACKIHGNSAMGEKVGKHLLQLQEESGMVDTVSRC 182
           +L+EAY+F+++MP+ PD ++WRSLLAAC IHG+  MGEKVGK LLQL+E S      S  
Sbjct: 490 KLEEAYDFIMQMPINPDAVIWRSLLAACNIHGDVVMGEKVGKFLLQLEEWSSAESPKS-- 547

Query: 183 EDFIALSNVYASAGRWKDLEMVREKMKDKCIQTEPGYSSVQLV 311
           ED+IALSNVYA A +W D+E VR KMK K I  + G S+VQ V
Sbjct: 548 EDYIALSNVYALAEKWDDVETVRIKMKAKSILNKAGSSAVQTV 590


>ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18970-like [Glycine max]
          Length = 477

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/107 (55%), Positives = 78/107 (72%)
 Frame = +3

Query: 6   LQEAYNFVIEMPLQPDKILWRSLLAACKIHGNSAMGEKVGKHLLQLQEESGMVDTVSRCE 185
           L+EAY+F++ MP+ PD ++WRSLL ACKIHG+  MGEKVGK LLQL+E S      S  E
Sbjct: 371 LEEAYDFIMRMPINPDAVIWRSLLGACKIHGDVVMGEKVGKFLLQLEEWSSAESPKS--E 428

Query: 186 DFIALSNVYASAGRWKDLEMVREKMKDKCIQTEPGYSSVQLVKS*IV 326
           D+IALSNVYA A +W D+E+VR+ MK K I ++ G S+VQ V   ++
Sbjct: 429 DYIALSNVYALAEKWDDVEIVRKTMKSKGILSKAGSSAVQTVSMAVI 475