BLASTX nr result
ID: Coptis23_contig00034882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00034882
(313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002300896.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002527095.1| polyadenylate-binding protein, putative [Ric... 133 2e-29
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l... 128 4e-28
>ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|222856974|gb|EEE94521.1|
predicted protein [Populus trichocarpa]
Length = 614
Score = 140 bits (353), Expect = 1e-31
Identities = 70/104 (67%), Positives = 84/104 (80%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N SET +DEDLKK FS YG+IT A VMKD SGKSKGFGFVNF+ D+AA+A+EK+NG +
Sbjct: 208 NLSETTSDEDLKKFFSNYGSITSAIVMKD-QSGKSKGFGFVNFQSPDSAAAAVEKLNGTT 266
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQESNGKVDKLHGANLYLK 313
NDKVWYVG A+ K ER+AELK++FEQE N + +KL ANLYLK
Sbjct: 267 FNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLK 310
Score = 67.4 bits (163), Expect = 1e-09
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N + + DE LK++FS +G+IT VM D G SKG GFV F + A+ A+ MNG
Sbjct: 311 NLDDKIDDEKLKELFSEFGSITSCKVMLD-QQGLSKGSGFVAFSTPEEASRALNGMNGKM 369
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQ 262
K YV +A+ + ERKA L++ F Q
Sbjct: 370 IGKKPLYVAVAQRREERKARLQAHFTQ 396
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N ++ ++ L++ F+++G + V D N+G+SKG+GFV FE + A SAI ++NG
Sbjct: 117 NLDTSIDNKALQETFASFGPVLSCKVAVD-NNGQSKGYGFVQFENEEAAQSAINRLNGML 175
Query: 182 RNDKVWYVGLAKSKTER 232
NDK +VG ER
Sbjct: 176 INDKEVFVGRFVRHQER 192
>ref|XP_002300896.1| predicted protein [Populus trichocarpa] gi|222842622|gb|EEE80169.1|
predicted protein [Populus trichocarpa]
Length = 648
Score = 140 bits (353), Expect = 1e-31
Identities = 69/104 (66%), Positives = 85/104 (81%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N SET +DEDLKKIFS+YG IT A VMKD N GKS+GFGFVNF+ D+AA+A+EK+NG +
Sbjct: 218 NLSETTSDEDLKKIFSSYGAITSAIVMKDQN-GKSRGFGFVNFQSPDSAAAAVEKLNGMT 276
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQESNGKVDKLHGANLYLK 313
+DKVWYVG A+ K ER+AELK+KFEQE N + +K+ ANLYLK
Sbjct: 277 FSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLK 320
Score = 67.4 bits (163), Expect = 1e-09
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N +T+ +E LK++FS +G+IT VM D G SKG GFV F + A+ A+ +MNG
Sbjct: 321 NLGDTIDEERLKELFSEFGSITSCKVMLD-QQGLSKGSGFVAFSTPEEASRALSEMNGKM 379
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQ 262
K YV +A+ + ER A L++ F Q
Sbjct: 380 IGKKPLYVAIAQRREERMARLQAHFSQ 406
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N + ++ L + F+++G + V D N+G+SKG+GF+ FE ++A SAI ++NG
Sbjct: 127 NLDTKIDNKALYETFASFGPVLSCKVAVD-NNGQSKGYGFIQFENEEDAQSAINRLNGML 185
Query: 182 RNDKVWYVGLAKSKTER 232
ND+ YVG + ER
Sbjct: 186 VNDREVYVGPFVRRLER 202
>ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|222856975|gb|EEE94522.1|
predicted protein [Populus trichocarpa]
Length = 649
Score = 140 bits (352), Expect = 1e-31
Identities = 70/104 (67%), Positives = 83/104 (79%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N SET +DEDLKK FS YG IT A VMKD SGKSKGFGFVNF+ D+AA+A+EK+NG +
Sbjct: 218 NLSETTSDEDLKKFFSNYGAITSAIVMKD-QSGKSKGFGFVNFQSPDSAAAAVEKLNGTT 276
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQESNGKVDKLHGANLYLK 313
NDKVWYVG A+ K ER+AELK++FEQE N + +KL ANLYLK
Sbjct: 277 FNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLK 320
Score = 67.4 bits (163), Expect = 1e-09
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N + + DE LK++FS +G+IT VM D G SKG GFV F + A+ A+ MNG
Sbjct: 321 NLDDKIDDEKLKELFSEFGSITSCKVMLD-QQGLSKGSGFVAFSTPEEASRALNGMNGKM 379
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQ 262
K YV +A+ + ERKA L++ F Q
Sbjct: 380 IGKKPLYVAVAQRREERKARLQAHFTQ 406
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N ++ ++ L++ F+++G++ V D N+G+SKG+GFV FE + A SAI ++NG
Sbjct: 127 NLDTSIDNKALQETFASFGSVLSCKVAVD-NNGQSKGYGFVQFENEEAAQSAINRLNGML 185
Query: 182 RNDKVWYVGLAKSKTER 232
NDK +VG ER
Sbjct: 186 INDKEVFVGRFVRHQER 202
>ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 657
Score = 133 bits (334), Expect = 2e-29
Identities = 65/105 (61%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N SET+T+EDL+K+F YGTIT A VMKD +GKS+GFGFVNF+ D+AA+A+EK+NG +
Sbjct: 230 NLSETITNEDLEKVFGVYGTITSALVMKD-QTGKSRGFGFVNFQDPDSAAAAVEKLNGTT 288
Query: 182 -RNDKVWYVGLAKSKTERKAELKSKFEQESNGKVDKLHGANLYLK 313
+DK WYVG A+ K+ER+AELK+KFEQE N + ++L ANLYLK
Sbjct: 289 AHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLK 333
Score = 67.0 bits (162), Expect = 1e-09
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N + + D LK++FS +G+IT VM D + G SKG GFV F + A+ A+++MNG
Sbjct: 334 NLDDNINDVKLKELFSEFGSITSCKVMLD-HQGVSKGSGFVAFSTPEEASRALKEMNGKM 392
Query: 182 RNDKVWYVGLAKSKTERKAELKSKF 256
K YV +A+ K ERKA L++ F
Sbjct: 393 IGRKPLYVAIAQRKEERKARLQAHF 417
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N TL ++ L + F+A+GT+ V D N G+SKG+GFV FE ++A AI ++G
Sbjct: 139 NLDSTLDNKLLHETFAAFGTVLSCKVAVDSN-GQSKGYGFVQFENEESAERAISFLDGMC 197
Query: 182 RNDKVWYVGLAKSKTER 232
NDK YVG + ER
Sbjct: 198 LNDKQVYVGFFVRQQER 214
>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 128 bits (322), Expect = 4e-28
Identities = 67/105 (63%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N SET TDEDLKK+F YGTIT A VMKDVN GKS+ FGFVNF+ D+AA+A+E++NG +
Sbjct: 220 NLSETYTDEDLKKLFGPYGTITSATVMKDVN-GKSRCFGFVNFQNPDSAAAAVERLNGTT 278
Query: 182 -RNDKVWYVGLAKSKTERKAELKSKFEQESNGKVDKLHGANLYLK 313
ND+V YVG A+ K ER+AELK+K EQE + +KL GANLYLK
Sbjct: 279 INNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLK 323
Score = 75.5 bits (184), Expect = 4e-12
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N ++ +DE LK +FS +GTIT VM D N G+SKG GFV+F + A+ A+ +MNG
Sbjct: 324 NLDDSFSDEKLKDLFSEFGTITSCKVMIDSN-GRSKGSGFVSFSTPEEASKALNEMNGKL 382
Query: 182 RNDKVWYVGLAKSKTERKAELKSKFEQ 262
K YV +A+ K ERKA L+++F Q
Sbjct: 383 IGRKPLYVAVAQRKEERKAHLQAQFAQ 409
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/78 (39%), Positives = 49/78 (62%)
Frame = +2
Query: 2 NFSETLTDEDLKKIFSAYGTITHAYVMKDVNSGKSKGFGFVNFEKSDNAASAIEKMNGYS 181
N ++ ++ L F+A+GT+ V D +SG+SKG+GFV F+ + A +AI+++NG
Sbjct: 129 NLDTSIDNKALHDTFAAFGTVLSCKVALD-SSGQSKGYGFVQFDNEEAAQNAIKRLNGML 187
Query: 182 RNDKVWYVGLAKSKTERK 235
NDK YVGL + ER+
Sbjct: 188 INDKQVYVGLFIRRQERE 205