BLASTX nr result

ID: Coptis23_contig00034877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034877
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange f...   201   4e-50
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              201   4e-50
ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002304399.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002519922.1| Rop guanine nucleotide exchange factor, puta...   198   3e-49

>ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 570

 Score =  201 bits (512), Expect = 4e-50
 Identities = 99/117 (84%), Positives = 107/117 (91%)
 Frame = -3

Query: 353 DVETMKEKFSKLLLGEDITGGRNGLATALALSNAITNLAASVFGELWKLEPLSEERKSRW 174
           DVE MKE+FSKLLLGEDITGG+ GL +ALALSNAITNLA SVFGELWKLEPLSEERK +W
Sbjct: 120 DVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKW 179

Query: 173 WREMRWFLSPTNYMVELVPAKQNGTNGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 3
            REM W LSPTNYMVELVPAKQ+G NG+TLEIMTPK R+DIH+NLPALQKLDSMLIE
Sbjct: 180 QREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIE 236


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  201 bits (512), Expect = 4e-50
 Identities = 99/117 (84%), Positives = 107/117 (91%)
 Frame = -3

Query: 353 DVETMKEKFSKLLLGEDITGGRNGLATALALSNAITNLAASVFGELWKLEPLSEERKSRW 174
           DVE MKE+FSKLLLGEDITGG+ GL +ALALSNAITNLA SVFGELWKLEPLSEERK +W
Sbjct: 119 DVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKW 178

Query: 173 WREMRWFLSPTNYMVELVPAKQNGTNGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 3
            REM W LSPTNYMVELVPAKQ+G NG+TLEIMTPK R+DIH+NLPALQKLDSMLIE
Sbjct: 179 QREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIE 235


>ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|222834106|gb|EEE72583.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  201 bits (511), Expect = 5e-50
 Identities = 99/117 (84%), Positives = 109/117 (93%)
 Frame = -3

Query: 353 DVETMKEKFSKLLLGEDITGGRNGLATALALSNAITNLAASVFGELWKLEPLSEERKSRW 174
           DVETMKEKF+KLLLGEDITGG++GL+TALALSNAITNLAA+VFGELWKLEPL EERK++W
Sbjct: 118 DVETMKEKFAKLLLGEDITGGQSGLSTALALSNAITNLAATVFGELWKLEPLPEERKTKW 177

Query: 173 WREMRWFLSPTNYMVELVPAKQNGTNGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 3
            REM W LSPTNYMVELVPAKQN  NG+ LEIMTPK R+DIHVNLPALQKLDSMLI+
Sbjct: 178 QREMDWLLSPTNYMVELVPAKQNCANGRMLEIMTPKARADIHVNLPALQKLDSMLID 234


>ref|XP_002304399.1| predicted protein [Populus trichocarpa] gi|222841831|gb|EEE79378.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  199 bits (507), Expect = 1e-49
 Identities = 98/117 (83%), Positives = 107/117 (91%)
 Frame = -3

Query: 353 DVETMKEKFSKLLLGEDITGGRNGLATALALSNAITNLAASVFGELWKLEPLSEERKSRW 174
           DVETMKEKF+KLLLGED TGGRNGL+ ALALSNAITNLAA+VFGELWKL+PL EERK++W
Sbjct: 92  DVETMKEKFAKLLLGEDFTGGRNGLSPALALSNAITNLAATVFGELWKLQPLPEERKTKW 151

Query: 173 WREMRWFLSPTNYMVELVPAKQNGTNGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 3
            REM W LSPTNYMVELVPAKQN  NG+ LEIMTPK R+DIHVNLPALQKLDSMLI+
Sbjct: 152 RREMDWLLSPTNYMVELVPAKQNCANGRALEIMTPKARADIHVNLPALQKLDSMLID 208


>ref|XP_002519922.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223540968|gb|EEF42526.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 526

 Score =  198 bits (504), Expect = 3e-49
 Identities = 98/117 (83%), Positives = 104/117 (88%)
 Frame = -3

Query: 353 DVETMKEKFSKLLLGEDITGGRNGLATALALSNAITNLAASVFGELWKLEPLSEERKSRW 174
           DVETMKEKF+KLLLGEDITGG  GL TALALSNAI NLAASVFGELWKLEPL EE K +W
Sbjct: 92  DVETMKEKFAKLLLGEDITGGCKGLTTALALSNAIANLAASVFGELWKLEPLPEENKKKW 151

Query: 173 WREMRWFLSPTNYMVELVPAKQNGTNGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 3
            +E+ W LSPTNYMVELVP KQNG NG+TLEIMTPK R+DIHVNLPALQKLDSMLIE
Sbjct: 152 RKELDWLLSPTNYMVELVPTKQNGANGRTLEIMTPKARADIHVNLPALQKLDSMLIE 208


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