BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034859
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              140   1e-31
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   140   1e-31
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   139   2e-31
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/87 (77%), Positives = 81/87 (93%)
 Frame = +1

Query: 1   RNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSGTLLPGVAIKLLNEVRKSGLRPD 180
           R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KSGT++  +AI+LLNEVR+SG++PD
Sbjct: 234 RTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPD 293

Query: 181 IITYNTLISACSRGSDLKEAVKIYDDL 261
           IITYNTLISACSR S+L+EAVK+Y+D+
Sbjct: 294 IITYNTLISACSRESNLEEAVKVYNDM 320


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/87 (77%), Positives = 81/87 (93%)
 Frame = +1

Query: 1   RNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSGTLLPGVAIKLLNEVRKSGLRPD 180
           R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KSGT++  +AI+LLNEVR+SG++PD
Sbjct: 209 RTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPD 268

Query: 181 IITYNTLISACSRGSDLKEAVKIYDDL 261
           IITYNTLISACSR S+L+EAVK+Y+D+
Sbjct: 269 IITYNTLISACSRESNLEEAVKVYNDM 295


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/87 (77%), Positives = 81/87 (93%)
 Frame = +1

Query: 1   RNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSGTLLPGVAIKLLNEVRKSGLRPD 180
           R GRF KVQELL+LM+SRGCEPDLVSFNTLINAR KSGT++  +AI+LLNEVR+SG++PD
Sbjct: 266 RTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPD 325

Query: 181 IITYNTLISACSRGSDLKEAVKIYDDL 261
           IITYNTLISACSR S+L+EAVK+Y+D+
Sbjct: 326 IITYNTLISACSRESNLEEAVKVYNDM 352


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/88 (76%), Positives = 79/88 (89%)
 Frame = +1

Query: 1   RNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSGTLLPGVAIKLLNEVRKSGLRPD 180
           R GRF KVQ +L+LM+ RGCEPDLVSFNTLINAR K+G + P VAI+LLNEVR+SGLRPD
Sbjct: 222 RTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPD 281

Query: 181 IITYNTLISACSRGSDLKEAVKIYDDLE 264
           IITYNTLISACSR S+L+EAVK++DD+E
Sbjct: 282 IITYNTLISACSRESNLEEAVKVFDDME 309


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/88 (73%), Positives = 79/88 (89%)
 Frame = +1

Query: 1   RNGRFAKVQELLELMKSRGCEPDLVSFNTLINARAKSGTLLPGVAIKLLNEVRKSGLRPD 180
           R GRF KVQELL+LM+ RGC+PDLVSFNTLINAR K+G ++P +AI+LLNEVR+SGLRPD
Sbjct: 266 RRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPD 325

Query: 181 IITYNTLISACSRGSDLKEAVKIYDDLE 264
            ITYNTLISACSR S+L+EA K++DD+E
Sbjct: 326 TITYNTLISACSRASNLEEAAKVFDDME 353