BLASTX nr result

ID: Coptis23_contig00034845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034845
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270199.2| PREDICTED: alpha-L-fucosidase 2-like [Vitis ...   273   1e-71
dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]             268   3e-70
ref|XP_003536603.1| PREDICTED: alpha-L-fucosidase 2-like [Glycin...   258   4e-67
ref|XP_002527476.1| conserved hypothetical protein [Ricinus comm...   258   4e-67
ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|2...   258   4e-67

>ref|XP_002270199.2| PREDICTED: alpha-L-fucosidase 2-like [Vitis vinifera]
          Length = 817

 Score =  273 bits (699), Expect = 1e-71
 Identities = 136/186 (73%), Positives = 151/186 (81%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1   EIWSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAMVWGGVVSETLQLNED 180
           E WSP +  G+D   ++ PLK+RF  PAKHWTDA PIGNGRLGAMVWGGV SETLQLNE 
Sbjct: 16  ECWSPGWGGGEDEGGSSDPLKVRFFGPAKHWTDALPIGNGRLGAMVWGGVASETLQLNEG 75

Query: 181 TLWTGVPGNYTNSDAPEALSQVRELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFD 360
           TLWTG PGNYTN DAP+ALS+VR+LVD G Y  ATEA  KLS  PSDVYQ LGD+ LEF+
Sbjct: 76  TLWTGTPGNYTNPDAPKALSEVRKLVDNGDYVAATEAAVKLSGNPSDVYQLLGDINLEFE 135

Query: 361 DSH-AYDVKSYQRELDLDTATVKVKYSVGDVEFTREHFTSGPHQVIVTKISASKSGSLSF 537
           DSH AY  ++Y RELDLDTATV +KYSVGDVE+TREHF S P QVIVTKIS SK GS+SF
Sbjct: 136 DSHLAYAEETYSRELDLDTATVTIKYSVGDVEYTREHFASYPDQVIVTKISGSKPGSVSF 195

Query: 538 TVSLDS 555
           TVSLDS
Sbjct: 196 TVSLDS 201


>dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]
          Length = 854

 Score =  268 bits (686), Expect = 3e-70
 Identities = 135/174 (77%), Positives = 147/174 (84%), Gaps = 1/174 (0%)
 Frame = +1

Query: 37  GETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAMVWGGVVSETLQLNEDTLWTGVPGNYTN 216
           GE   QPLK+RF EPAKHWTDAAPIGNGRLGAMVWGGV +ETLQLN+DTLWTGVPGNYTN
Sbjct: 26  GEEAAQPLKLRFLEPAKHWTDAAPIGNGRLGAMVWGGVPTETLQLNDDTLWTGVPGNYTN 85

Query: 217 SDAPEALSQVRELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSH-AYDVKSYQ 393
            DAP  LS+VR+LVD GKY EA+ A F LS  PSDVYQPLG + LEF DSH AY   +YQ
Sbjct: 86  PDAPTVLSKVRKLVDDGKYAEASLAAFDLSGHPSDVYQPLGTMNLEFGDSHVAY--SNYQ 143

Query: 394 RELDLDTATVKVKYSVGDVEFTREHFTSGPHQVIVTKISASKSGSLSFTVSLDS 555
           RELDL TAT KV YS+GDVEFTREHF+S PHQV+VTKISA+KSGSLSF VSLDS
Sbjct: 144 RELDLTTATAKVTYSLGDVEFTREHFSSNPHQVLVTKISANKSGSLSFIVSLDS 197


>ref|XP_003536603.1| PREDICTED: alpha-L-fucosidase 2-like [Glycine max]
          Length = 877

 Score =  258 bits (659), Expect = 4e-67
 Identities = 124/184 (67%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
 Frame = +1

Query: 7   WSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAMVWGGVVSETLQLNEDTL 186
           W P+  + +D +   +PLK+ F+EPA HWTDA PIGNGRLGAMVWG V SE LQLNEDTL
Sbjct: 50  WKPSLTNAEDDDPPPRPLKVTFAEPATHWTDAIPIGNGRLGAMVWGAVPSEALQLNEDTL 109

Query: 187 WTGVPGNYTNSDAPEALSQVRELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDS 366
           WTG+PG+YTN  AP+AL++VR+LV+  K+ EAT A  KLS +PSDV+Q LGD++LEF DS
Sbjct: 110 WTGIPGDYTNKSAPQALAEVRKLVNDRKFAEATAAAVKLSGEPSDVFQLLGDIKLEFHDS 169

Query: 367 HA-YDVKSYQRELDLDTATVKVKYSVGDVEFTREHFTSGPHQVIVTKISASKSGSLSFTV 543
           H  Y  +SY RELDLDTAT K+KYSVGDVEFTREHF S P QVIVT++SASK GSLSFTV
Sbjct: 170 HLNYSKESYYRELDLDTATAKIKYSVGDVEFTREHFASNPDQVIVTRLSASKPGSLSFTV 229

Query: 544 SLDS 555
             DS
Sbjct: 230 YFDS 233


>ref|XP_002527476.1| conserved hypothetical protein [Ricinus communis]
           gi|223533116|gb|EEF34874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 849

 Score =  258 bits (659), Expect = 4e-67
 Identities = 127/184 (69%), Positives = 151/184 (82%), Gaps = 1/184 (0%)
 Frame = +1

Query: 7   WSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAMVWGGVVSETLQLNEDTL 186
           W P+    ++ +   +PLKI FS PAKHWTDA PIGNGRLGAMV+GGV SETL++NEDTL
Sbjct: 20  WRPSSLIENNDDDEDRPLKIVFSGPAKHWTDAIPIGNGRLGAMVFGGVASETLRINEDTL 79

Query: 187 WTGVPGNYTNSDAPEALSQVRELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDS 366
           WTG PGNYTN +APEAL+QVR+LV   KY EAT    KLS  PS++YQ LGD++LEFDDS
Sbjct: 80  WTGTPGNYTNPNAPEALTQVRKLVGDRKYAEATTEAVKLSGLPSEIYQVLGDIKLEFDDS 139

Query: 367 H-AYDVKSYQRELDLDTATVKVKYSVGDVEFTREHFTSGPHQVIVTKISASKSGSLSFTV 543
           H +YD K+YQRELDLDTAT +VKYS+GDVE+TREHF S P+QV+VTKI+ASK GS+SFTV
Sbjct: 140 HLSYDEKTYQRELDLDTATARVKYSLGDVEYTREHFASNPNQVVVTKIAASKPGSVSFTV 199

Query: 544 SLDS 555
            LDS
Sbjct: 200 LLDS 203


>ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|222846012|gb|EEE83559.1|
           predicted protein [Populus trichocarpa]
          Length = 808

 Score =  258 bits (659), Expect = 4e-67
 Identities = 125/176 (71%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
 Frame = +1

Query: 31  DDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAMVWGGVVSETLQLNEDTLWTGVPGNY 210
           D+   +++PL++ FS PAKHWTDA PIGNGRLGAM+WGGV  ETLQLNEDTLWTG+PG+Y
Sbjct: 3   DNNGESSKPLRVTFSGPAKHWTDAIPIGNGRLGAMIWGGVALETLQLNEDTLWTGIPGDY 62

Query: 211 TNSDAPEALSQVRELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSH-AYDVKS 387
           TN +AP AL +VR+LVD G+Y EAT A  KLS   SDVYQ LGD++LEFDDSH  YD K+
Sbjct: 63  TNPNAPAALLEVRKLVDNGQYAEATTAAEKLSGNQSDVYQLLGDIKLEFDDSHLKYDEKT 122

Query: 388 YQRELDLDTATVKVKYSVGDVEFTREHFTSGPHQVIVTKISASKSGSLSFTVSLDS 555
           Y+RELDLDTAT +VKYSV D+E+TREHF S P+QVIVTKIS SK GS+SFTVSLDS
Sbjct: 123 YKRELDLDTATARVKYSVADIEYTREHFASNPNQVIVTKISGSKPGSVSFTVSLDS 178


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