BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034801
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72467.1| putative protein [Arabidopsis thaliana]                64   2e-12
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          60   3e-11
emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera]    52   8e-11
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    55   8e-11
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    61   8e-11

>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 63.9 bits (154), Expect(2) = 2e-12
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = -3

Query: 321 ITWRCSLKVDFKKVYDMVSWKIVLCML*RYQVPTKMI*WITTCITTPSYSILINGDAEGF 142
           I+ RC++K+D  K  D V W  ++  L     P   I WI  CITTPS+S+ +NG+  GF
Sbjct: 143 ISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGF 202

Query: 141 FQGKGG 124
           FQ   G
Sbjct: 203 FQSSRG 208



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = -2

Query: 145 FFSRKRGLRQGDPLSPYLFIFEM 77
           FF   RGLRQG  LSPYLF+  M
Sbjct: 202 FFQSSRGLRQGCALSPYLFVICM 224


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 60.5 bits (145), Expect(2) = 3e-11
 Identities = 24/66 (36%), Positives = 41/66 (62%)
 Frame = -3

Query: 321 ITWRCSLKVDFKKVYDMVSWKIVLCML*RYQVPTKMI*WITTCITTPSYSILINGDAEGF 142
           I+ R ++K+D  K +D V W  +  +L    +P++ + WI  C+TT S+S+ +NG+  G+
Sbjct: 40  ISSRYAIKIDISKAFDSVQWSFLRNVLLAMDIPSEFVHWIMLCVTTASFSVQVNGELAGY 99

Query: 141 FQGKGG 124
           FQ K G
Sbjct: 100 FQSKCG 105



 Score = 32.3 bits (72), Expect(2) = 3e-11
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -2

Query: 145 FFSRKRGLRQGDPLSPYLFIFEM 77
           +F  K GLRQG  LSPYLF+  M
Sbjct: 99  YFQSKCGLRQGCSLSPYLFVISM 121


>emb|CAN62611.1| hypothetical protein VITISV_033248 [Vitis vinifera]
          Length = 954

 Score = 52.0 bits (123), Expect(2) = 8e-11
 Identities = 23/54 (42%), Positives = 35/54 (64%)
 Frame = -3

Query: 300 KVDFKKVYDMVSWKIVLCML*RYQVPTKMI*WITTCITTPSYSILINGDAEGFF 139
           K+D +K YD ++W  +L +L R     + I WI+ CI+T ++S+LIN   EGFF
Sbjct: 716 KLDIEKAYDHLNWNFLLSVLRRMGFGERWIGWISWCISTATFSVLINDTPEGFF 769



 Score = 39.3 bits (90), Expect(2) = 8e-11
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -2

Query: 145 FFSRKRGLRQGDPLSPYLFIFEM 77
           FF++ R LRQGDPLSPYLF+  M
Sbjct: 768 FFNKSRXLRQGDPLSPYLFVIGM 790


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 54.7 bits (130), Expect(2) = 8e-11
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = -3

Query: 300 KVDFKKVYDMVSWKIVLCML*RYQVPTKMI*WITTCITTPSYSILINGDAEGFFQ 136
           K+D +K YD V W  +L ++ +     K I WI  CI+T S+S+L+NG   GFFQ
Sbjct: 308 KLDIEKAYDNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVNGTPTGFFQ 362



 Score = 36.6 bits (83), Expect(2) = 8e-11
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -2

Query: 145 FFSRKRGLRQGDPLSPYLFIFEM 77
           FF   + LRQGDPLSPYLF+  M
Sbjct: 360 FFQSSKRLRQGDPLSPYLFVIAM 382


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 60.8 bits (146), Expect(2) = 8e-11
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = -3

Query: 321 ITWRCSLKVDFKKVYDMVSWKIVLCML*RYQVPTKMI*WITTCITTPSYSILINGDAEGF 142
           ++ RC+LK+D  K +D V WK ++ +L     P +   WIT CITT S+S+ +NG+  G 
Sbjct: 478 VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGV 537

Query: 141 F 139
           F
Sbjct: 538 F 538



 Score = 30.4 bits (67), Expect(2) = 8e-11
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -2

Query: 142 FSRKRGLRQGDPLSPYLFIFEM 77
           FS  R LRQG  LSPYLF+  M
Sbjct: 538 FSSARELRQGCSLSPYLFVISM 559