BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034788
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    117   1e-24
gb|ABG37671.1| integrase [Populus trichocarpa]                        117   1e-24
emb|CAN68847.1| hypothetical protein VITISV_007652 [Vitis vinifera]   114   8e-24
ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259...   113   1e-23
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]   113   1e-23

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/115 (48%), Positives = 74/115 (64%)
 Frame = -3

Query: 346 YPQRLVVSKNDENFDEIREVFKNLTINLPFQHAIKSLPGHTKFLKELCTKKRKTNIPHVA 167
           +P RL   KN    ++I E FK + IN+P   AI+ +P + KFLK+LCTKKR TN+P   
Sbjct: 462 FPDRLKPRKNSPQVEKILETFKQVKINIPLLDAIEQIPSYAKFLKDLCTKKRTTNVPKKV 521

Query: 166 FLTKQYPSLSEHNGIVKYKDPGRPTVQCTLGDTFITTALLDLGASVNLLPFYLYK 2
           FL      +      +KYKDPG PT+ C +G+T I  ALLDLGASVNLLP+ +Y+
Sbjct: 522 FLAANLSEIFSKPMPLKYKDPGCPTIPCVIGNTHIDKALLDLGASVNLLPYSVYQ 576


>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/117 (47%), Positives = 77/117 (65%)
 Frame = -3

Query: 352 HSYPQRLVVSKNDENFDEIREVFKNLTINLPFQHAIKSLPGHTKFLKELCTKKRKTNIPH 173
           H +P  +   +   +  EI E FK + IN+P   AIK +P + KFLK+LCT KRK N+  
Sbjct: 99  HPFPHAMTKQRKVNHNSEIFETFKQVRINIPLLDAIKEVPSYAKFLKDLCTVKRKLNVKK 158

Query: 172 VAFLTKQYPSLSEHNGIVKYKDPGRPTVQCTLGDTFITTALLDLGASVNLLPFYLYK 2
            AFL KQ  ++ ++N  +KYKDPG PT+ C +G+  I  ALLDLGASVNLLP+ +++
Sbjct: 159 KAFLAKQVSAILQNNNALKYKDPGCPTISCFIGEHKIKRALLDLGASVNLLPYSVFQ 215


>emb|CAN68847.1| hypothetical protein VITISV_007652 [Vitis vinifera]
          Length = 1551

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 IGNINQGNLQAVIILHSYPQ----RLVVSKNDENFDEIREVFKNLTINLPFQHAIKSLPG 230
           +  + + +  AVI L +  +    +L+  K  +   EI EV K + IN+P    IK +P 
Sbjct: 321 VSEVQKEDCNAVITLRNGKEYEGPKLLRHKVGDKTLEILEVLKQVKINIPLLDMIKQVPA 380

Query: 229 HTKFLKELCTKKRKTNIPHVAFLTKQYPSLSEHNGIVKYKDPGRPTVQCTLGDTFITTAL 50
           + KFLK+LCT KR+  +   AFLT+Q  ++ E+  +VKYKDPG PT+   +GD+F+  AL
Sbjct: 381 YAKFLKDLCTVKRRIKLSXKAFLTEQVSAIIENKAMVKYKDPGCPTISVQIGDSFVEXAL 440

Query: 49  LDLGASVNLLPFYLYK 2
           LDLGASVNLLP+ +YK
Sbjct: 441 LDLGASVNLLPYSIYK 456


>ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259900 [Vitis vinifera]
          Length = 1409

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/115 (47%), Positives = 76/115 (66%)
 Frame = -3

Query: 346 YPQRLVVSKNDENFDEIREVFKNLTINLPFQHAIKSLPGHTKFLKELCTKKRKTNIPHVA 167
           +P  +   K  +   EI EV K + IN+P    IK +P + KFLK+LCT KR+  +   A
Sbjct: 506 FPSAMQRHKVGDKTLEILEVLKQVKINIPLLDMIKQVPAYAKFLKDLCTVKRRIKLSKKA 565

Query: 166 FLTKQYPSLSEHNGIVKYKDPGRPTVQCTLGDTFITTALLDLGASVNLLPFYLYK 2
           FLT+Q  ++ E+  +VKYKDPG PT+   +GD+F+  ALLDLGASVNLLP+ +YK
Sbjct: 566 FLTEQVSAIIENKAMVKYKDPGCPTISVQIGDSFVEKALLDLGASVNLLPYSIYK 620


>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/115 (47%), Positives = 76/115 (66%)
 Frame = -3

Query: 346 YPQRLVVSKNDENFDEIREVFKNLTINLPFQHAIKSLPGHTKFLKELCTKKRKTNIPHVA 167
           +P  +   K  +   EI EV K + IN+P    IK +P + KFLK+LCT KR+  +   A
Sbjct: 532 FPSAMQRHKVGDKTLEILEVLKQVKINIPLLDMIKQVPAYAKFLKDLCTVKRRIKLSKKA 591

Query: 166 FLTKQYPSLSEHNGIVKYKDPGRPTVQCTLGDTFITTALLDLGASVNLLPFYLYK 2
           FLT+Q  ++ E+  +VKYKDPG PT+   +GD+F+  ALLDLGASVNLLP+ +YK
Sbjct: 592 FLTEQVSAIIENKAMVKYKDPGCPTISVQIGDSFVEXALLDLGASVNLLPYSIYK 646